Bordetella holmesii ATCC 51541: D560_1095
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Entry
D560_1095 CDS
T03052
Name
(GenBank) radical SAM superfamily protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bho03009
]
D560_1095
Enzymes [BR:
bho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
D560_1095
Ribosome biogenesis [BR:
bho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D560_1095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
AHV93589
LinkDB
All DBs
Position
1033644..1034714
Genome browser
AA seq
356 aa
AA seq
DB search
MRFSDFDLRLAALGALPVHRARLTRVWLKGQPLDTGTRRRSSEHFLPLALREAVPALTAQ
LDGLARVHSEHAGHDGSRLLVELADGQMIESVLLPRDGLCVSTQVGCAVGCRFCMTGKSG
LIRQVASMEILAQVVLARRLRPVKKVVFMGMGEPAHNLDNVLEAIDLLGTEGDIGHKNIV
FSTVGDRRVFDALPQQRIKPALALSLHTTKADLRQQLLPRAPKISPQELVDLGEHYARAT
GYPIQYQWTLLKGVNDGDDEFDAIVTLLKGKYGVLNVIPFNSLEGDDFQRPDGARTRHIV
GYLHSRGVLTKVRNSAGQDVDAGCGQLRARAEAGARVIELPRRRQATLSIEQATPP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttccgacttcgacctccgccttgccgctcttggcgcactgcccgtgcatcgc
gcacggctgacgcgcgtctggctgaaaggacagccgctggacaccggcacgcgacggcgc
agctctgaacactttctgccgcttgccctgcgcgaggccgtgcctgccctgacggcgcaa
ctcgatggtctggctcgtgtccactccgagcatgccggccatgacggctcgcgcctgctc
gtcgagctcgccgacgggcagatgatcgaaagcgtcctgttgccgcgcgatggcctttgc
gtctcgacccaggtcggctgcgcggtgggctgccgcttttgcatgaccggcaagagcggt
ctgatccggcaggtcgcgagcatggagatccttgcccaggtcgtgctggccagacgcttg
cgcccggtaaaaaaagtcgtcttcatgggcatgggcgagccggcgcacaacctcgacaac
gtcctcgaagccatcgacctgcttggcaccgagggcgatatcggccacaagaacatcgtg
ttctccacggtgggcgacaggcgcgtgttcgacgccttgccgcaacagcgcatcaagccc
gccttggcactgtcgttacacacgaccaaggccgatctgcgccagcaactcctgccgcgc
gcgccaaaaatctcacctcaggagctcgtcgatcttggcgagcactatgcccgcgccacc
ggctacccgatccaataccaatggacgctgctcaaaggcgtcaacgatggtgatgacgaa
ttcgacgccatcgtgacgctgctcaagggcaagtatggcgtgctcaacgtcatccccttc
aacagcctggagggcgatgacttccagcgccccgacggcgcccgcacgcgccacatcgtc
ggctatctgcacagccggggtgtattgaccaaggtcagaaacagcgccggccaggatgtc
gacgccggctgtggccagttgcgcgcgcgcgccgaggccggcgcgcgggtgatcgagcta
cctcggcgccgccaggcgacgctttccattgagcaggccaccccgccgtaa
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