Bordetella holmesii ATCC 51541: D560_1138
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Entry
D560_1138 CDS
T03052
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00730
Thiamine metabolism
bho01100
Metabolic pathways
bho01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D560_1138 (thiC)
Enzymes [BR:
bho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D560_1138 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHV91631
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Position
1078294..1080207
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AA seq
637 aa
AA seq
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MNANPKFLAATAEVDAAAVAPLPKSRKIYEIGSRPDIRVPFREIEQHDTPTMFGGEHNPP
LTVYDTSGPYTDPQVTIDIRRGLQELRRGWIDERGDVEVLDGPSSEYGRGRLEDPKLTAM
RFDLRRPPRRAKTGANVTQMHYARRGIVTPEMEYVAIRESLRREHYLESLRASGPEGEKM
ARRLMRQHPGQSFGAAIPKAITAEFVRDEIARGRAIIPANINHPEVEPMIIGRNFLVKIN
ANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGAVPIY
QALEKVDGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLPFIPMTADRMTGIVSRGGS
IIAKWCLAHNKESFLYERFEEICEIMKAYDVSFSLGDGLRPGSGYDANDEAQFAELKTLG
ELTQVAWKHDVQVMIEGPGHVPMQMIKENMELQLEHCHEAPFYTLGPLTTDIAPGYDHIT
SGIGAAIIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAVRD
NALSKARFEFRWDDQFNLGLDPDTAREFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDV
REYAASQGLSEQQALSQGMQEKAIEFVKKGAEVYHRN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacccgaagttcctggccgccacggccgaggtcgacgccgcggccgtcgcc
ccgcttcccaaatcccgcaaaatctacgaaatcggctcgcggcccgatattcgcgtgcct
tttcgcgaaatcgagcagcacgacacgcctacgatgttcggtggcgagcacaacccgccc
ctgaccgtctacgacaccagcggcccctacaccgacccgcaggtcacgatcgacatccgc
cgcggcctgcaagaactgcgccgcggctggatcgacgagcgtggcgacgtggaggtcctc
gacggcccgagcagtgaatatggccgcggccgcctggaagaccccaaactgacggcgatg
cgtttcgatttgcgccgcccgccgcgccgcgccaaaaccggcgccaacgtcacgcagatg
cattacgcccgccgcggcatcgtcacgccagagatggagtacgttgccatccgcgagagt
ctgcgccgcgaacactatctggagtcgctgcgcgccagcggccccgagggtgagaaaatg
gcccgccgcctgatgcgccaacacccggggcagtcatttggcgccgcgatcccgaaggcc
atcaccgcggaattcgtacgcgacgaaatcgcgcgcggccgcgccatcatcccggccaat
atcaaccatccggaagtcgaaccgatgatcatcggacgcaacttcctggtcaagatcaat
gccaatatcggtaactcggcggtcagttcgggcatcggcgaagaggtcgaaaaaatgacc
tgggccatccgctggggcggcgataccgtcatggacctgtccaccggcaagcacatccac
gagacacgcgaatggatcattcgcaattcgcccgtgcccatcggtgccgtgcccatctac
caggcgctggaaaaagtcgacggcaaggccgaagacctgacctgggagattttccgcgac
acgctgatcgagcaggccgaacaaggggtggactacttcactatccacgccggcgtccgc
ctgcccttcatccccatgacggccgaccgcatgacgggcatcgtctcgcggggcggctcc
atcattgccaagtggtgtctggcgcacaacaaggagagcttcctctatgagcgtttcgag
gaaatctgcgaaatcatgaaggcctatgacgtgagcttctcgcttggcgacggcttgcgc
cccggctcggggtatgacgccaatgacgaggcgcagttcgccgaactcaagacgctgggc
gagctgactcaggtcgcctggaagcacgacgtgcaggtcatgatcgaaggcccgggccac
gtgcccatgcagatgatcaaagaaaacatggagctgcagctcgaacactgtcacgaggcg
ccgttctacacgctcggcccgctgaccaccgacatcgctccgggctacgaccacatcacc
tcgggcatcggcgcggcgatcatcggctggtatggcacggccatgctctgctacgtcacc
cccaaggagcacctgggcctgcccaataaaaaggacgtcaaggacggcatcatcacctac
aagattgccgcccacgccgccgacctggccaagggccatccgggtgcggccgtgcgcgac
aacgcgctgtcgaaggcacgctttgaattccgctgggacgatcagttcaatctcgggctg
gatccggacaccgcgcgggagttccacgacgagacgctgcccaaagactcgatgaaggtg
gcgcacttctgctcgatgtgcggcccgcatttctgcagcatgaagatcactcaggacgtg
cgcgaatacgccgcgagccaaggtctgtcggagcaacaggccttgagtcaaggcatgcag
gaaaaagccatcgagttcgtgaaaaaaggtgcagaggtctatcaccgcaactaa
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