Bordetella holmesii ATCC 51541: D560_1214
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Entry
D560_1214 CDS
T03052
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00061
Fatty acid biosynthesis
bho00071
Fatty acid degradation
bho01100
Metabolic pathways
bho01212
Fatty acid metabolism
bho02024
Quorum sensing
bho04146
Peroxisome
Module
bho_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D560_1214
00071 Fatty acid degradation
D560_1214
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D560_1214
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_1214
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bho01004
]
D560_1214
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bho04147
]
D560_1214
Enzymes [BR:
bho01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D560_1214
Lipid biosynthesis proteins [BR:
bho01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D560_1214
Exosome [BR:
bho04147
]
Exosomal proteins
Exosomal proteins of breast milk
D560_1214
Exosomal proteins of breast cancer cells
D560_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHV94416
LinkDB
All DBs
Position
1152255..1154225
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AA seq
656 aa
AA seq
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MAHPQPPARPAAAQTFPALLLEHASVRPSRPAIREKDLGIWQTLSWAEVAERVRLLAHGL
AALGIGPGMHIAVIGENRSRLYIAMMAAQTLGAIPVPLYQDAVAQEMVYVLQDAQIRVVV
VEDQEQVDKMLEVRAQCPALRTVVYDDPRGMRHYHDDLLQSYEALEDVGRQHAQEHPEFY
LQAAHAVQPHDTVAMFYTSGTTGKPKGVVLTHHALIDRAQAVARMENLTDQEDVLAYLPP
AWIGQNMFSYTQLLVSGFTVNHPESPDTVSIDMRDIGPTYYFAPPRVLEGLLTHVMIRME
DAGLVKRKLFGACMNLARQVGARILDGESVSVWDRLRYRLGDLLIYGPLRNALGMNRVRV
AYTAGEAIGPDLFVFYRSIGINLKQLYGSTETSVFVCVQPDGQVRDDTVGPPVEGVQIRV
ADNGEVLVKSPGLFKEYYRNPAATEEARDAEGWFRTGDAGYLDGDGQLKIIDRAKDVGKL
ADGSLFAPKYIENKLKFFPHIKEAVAFGADREHACAFINIDLEAVGNWAERRGLAYAGYT
DLAGKDEVYALIRECLEKVNADLAADPRLAASQIHRFLILHKELDPDDDELTRTRKVRRA
FIAQKYGVLIDALYSDKDRQFIETEVKFEDGRSGKISADLRISPATTYPAITAKAA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtggcacatccccagcccccggcgcgcccggcggcagcgcagaccttccccgcgcttctg
ctcgaacacgccagtgtgcgcccatcgcgcccggccatccgcgaaaaagatctgggcatc
tggcagaccctgagctgggccgaggtggccgagcgcgtgcgtctgctggcccatggcctg
gccgcattgggcatcggccctggcatgcatatcgccgtcatcggtgagaaccggtcccgg
ttgtacatcgccatgatggccgcgcagacactgggcgcgatcccggtaccgctataccag
gacgcagtggcccaggaaatggtctacgtgctgcaggatgcgcagatccgcgtcgtggtt
gtggaggaccaggaacaggtcgacaagatgctggaagtgcgcgcgcaatgcccggcactg
cgcaccgtggtctatgacgatccgcgcggcatgcgtcactaccacgatgacctgctgcaa
tcctatgaagcgctcgaagacgtcggtcgccagcacgcccaggaacatcccgagttctat
ctgcaggccgcgcacgccgtgcagccccacgacacggtggccatgttctatacatcagga
acgacgggcaagcccaagggcgtagtgttgactcatcacgctctgatcgaccgggcccag
gccgtggcgcggatggaaaacctgaccgaccaggaagatgttctggcttatctgccaccc
gcatggataggccagaacatgttctcctatacccagcttctggtgtccggtttcactgtc
aaccatccggaatcaccggatacggtgtccatcgatatgcgcgatatcggacctacgtat
tacttcgctccgccgcgcgtcctcgaaggtctgttgacgcacgtgatgatccgcatggaa
gacgccggcctggtcaagcgaaaactgtttggcgcctgcatgaacttggctcgccaggtc
ggcgcacgcatcctcgatggtgagtcggtatcggtgtgggacaggctgcgctaccgactc
ggcgatctgctcatctacggcccgttacgcaatgccctgggcatgaaccgtgtacgtgtg
gcttacacggcaggtgaagccatcggaccagatctcttcgtcttctatcgatccatcggc
atcaatctcaagcaactgtatggttccaccgagacctccgtctttgtgtgcgtgcagccc
gatgggcaagtacgtgacgacaccgtaggccctcctgtcgaaggcgtacagatccgggtg
gccgacaacggcgaggtcctcgtcaaaagcccggggctgttcaaggagtactaccgcaac
ccggccgctaccgaagaggcccgcgacgccgagggctggtttcgcaccggcgacgccggc
tatctggatggcgacgggcagctgaaaatcatcgatcgcgcaaaggatgtcggcaaactt
gccgatggcagcctctttgcccccaagtacatcgagaacaagctcaagttcttcccgcac
atcaaggaagccgtagccttcggagccgatcgcgagcacgcatgtgcctttatcaacatc
gacctggaagccgttgggaattgggccgaacggcgcggtctggcgtatgccggttatacc
gatctggccggcaaggatgaagtctatgccctgatccgcgagtgcctggagaaagtcaat
gccgacctggccgccgacccgcggctggcagcctcgcagattcatcgctttctcatcctg
cacaaggagctggatccggacgacgatgagctcacgcggacccgcaaggttcgtcgcgcg
ttcatcgcccaaaagtatggcgtgctgatcgatgcgctctacagcgacaaggaccgccag
ttcattgaaaccgaggtcaagttcgaagacggccgcagcggcaagatttccgccgacctg
cgcatcagtccagcgacgacctatcctgccatcaccgccaaggccgcttga
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