Bordetella holmesii ATCC 51541: D560_1237
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Entry
D560_1237 CDS
T03052
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D560_1237 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_1237 (ung)
Enzymes [BR:
bho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D560_1237 (ung)
DNA repair and recombination proteins [BR:
bho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D560_1237 (ung)
Prokaryotic type
D560_1237 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHV91078
LinkDB
All DBs
Position
1170149..1170907
Genome browser
AA seq
252 aa
AA seq
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MAIDNRLLAHTLAAQVADLPTEWTRALAPPRVALALENIIGHVESRLAEGATVYPATPLR
ALGCLQPSAVRVVILGQDPYHGPGQAQGLAFSVPDDCKCPPSLRNMFKEIGRDYALSGTP
GHDLSPWVEQGVLLLNTSLTVEDGQPGSHAKKGWETVTDALFTRVAQDPVPKAFLLWGAH
AQAKAALMPPGHPHLVLTANHPSPLSATRPPAPFIGCGHFRLTNEWLEKHGQTLIDWTRT
FKKNPRQAEFRL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgacaatcgcttgcttgcccacactctggccgcccaggtggccgatctgccc
accgagtggacccgggccctggctccgccccgcgtcgcgctggcgctggagaacatcatc
gggcatgtggagtcacggctggcagaaggcgccaccgtctatcccgccaccccactgcgt
gctttgggctgcctgcagccatcggcggtgcgcgtggtgatactgggccaggacccttat
catggcccgggccaggcgcagggtctggccttctcggtgcccgatgactgcaaatgcccg
cccagcctgcgcaatatgttcaaggaaatcgggcgcgactatgccctgtccggcactcca
ggccatgatctgagtccctgggtcgagcagggagtgttgcttttaaacacgtcgttgacc
gtcgaggacggccaacccggatcgcacgcgaaaaagggctgggaaacggtgaccgacgcc
ctctttactcgcgtggcgcaggatccggttcccaaggcctttctcctatggggcgcccat
gcccaggccaaggcggcgttgatgcccccaggccacccccatctggtgctcacggccaat
cacccttcgcccttgtcggcgacgcgaccgcccgcgccgttcatcggttgcggacacttc
cgcctgaccaacgaatggctggaaaaacacggtcaaaccctgattgactggacccgaact
ttcaaaaaaaacccccgccaggcggaatttcggttatga
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