Bordetella holmesii ATCC 51541: D560_1297
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Entry
D560_1297 CDS
T03052
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00521
Streptomycin biosynthesis
bho00523
Polyketide sugar unit biosynthesis
bho00541
Biosynthesis of various nucleotide sugars
bho01100
Metabolic pathways
bho01110
Biosynthesis of secondary metabolites
bho01250
Biosynthesis of nucleotide sugars
Module
bho_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D560_1297 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D560_1297 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D560_1297 (rfbC)
Enzymes [BR:
bho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D560_1297 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHV91115
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Position
complement(1224178..1224750)
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AA seq
190 aa
AA seq
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MNIRPTALAGVLLIEPHMLADDRGWFAERFRQDRFEAALNATGQALPGAFVQENHSRSGR
GVLRGLHYQLAPQAQGKLVSVVAGEVFDVAVDVRPGSASFGQWIGVTLSAADGRSLWIPA
GFAHGFLSLAEGSEVLYKVTAYYSASHERALRWDDPAIGIRWPAAPALMSARDAQAPGLH
EAGRDGQLPV
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgtcccaccgccttggcaggcgtgttattgatcgagccgcacatgctggcc
gatgaccgcggctggtttgccgagcggttccggcaggacaggttcgaggcggcgctcaac
gccaccggccaggctctgcctggtgccttcgtgcaggagaatcattcccgttcggggcgc
ggtgtcttgcgtggcttgcactaccagttggcgccgcaagcgcagggcaagttggtcagc
gtagtggctggagaagtgttcgacgtggccgtcgatgtgcgtcccggttcggccagtttc
ggtcaatggatcggagtgacgctgtcagcggctgatggccgcagcctgtggatcccagcc
ggtttcgcgcatggctttctgtcattggccgaaggcagcgaagtgctctataaggtcacg
gcctactactcggccagccacgagcgcgccttgcgctgggacgaccccgccattggtata
cgctggcccgccgcgcccgccttgatgtcggcgcgcgacgcgcaggcccctgggctgcac
gaggccggcagggatggccaactgcctgtctga
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