Bordetella holmesii ATCC 51541: D560_1300
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Entry
D560_1300 CDS
T03052
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00521
Streptomycin biosynthesis
bho00523
Polyketide sugar unit biosynthesis
bho00525
Acarbose and validamycin biosynthesis
bho00541
Biosynthesis of various nucleotide sugars
bho01100
Metabolic pathways
bho01110
Biosynthesis of secondary metabolites
bho01250
Biosynthesis of nucleotide sugars
Module
bho_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D560_1300 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D560_1300 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D560_1300 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D560_1300 (rfbB)
00525 Acarbose and validamycin biosynthesis
D560_1300 (rfbB)
Enzymes [BR:
bho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D560_1300 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AHV94143
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All DBs
Position
complement(1226521..1227579)
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AA seq
352 aa
AA seq
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MKILITGGAGFIGSALIRHIVRDTQDSVVNVDKLSYAGNLASLQECASHPRHSFERVDIC
DGAALQAVFERHRPDAVMHLAAESHVDRSIDGPGQFIQTNLVGSYVLLEAARTYWAGLPQ
PARENFRFLQVSTDEVYGDLGLRAGRFIETSPYAPSSPYAASKAGADHLARAWHRTYGLP
VVVTNASNNYGPCQFPEKLIPLMLVSALRGWPLTIYGAGDQVRDWIYVEDHARALCAALR
LGRPGQTYNIGGSCELRNLEVVQQLCDLLQVLRPPKMGHYRDLIAHVADRPGHDRRYALD
SGKAAAELGWTPREDFGSGLAKTVAWYLDNPEWIADVESGAYPARWTGANAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgattaccggcggcgccggtttcatcggttcggcgctgattcgccacatc
gtccgtgacacgcaggacagcgtggtcaatgtcgacaagctcagctatgccggcaacctt
gcctccttgcaggaatgcgcctcgcacccccgccacagcttcgagcgtgtggatatctgc
gacggggcggccctgcaggcggtcttcgagcgtcatcgtcccgatgccgtcatgcatctg
gcggcggagtcgcacgtggatcgatccatcgatggtccggggcagttcatacagaccaat
ctggtgggcagttatgtcctgctggaagccgcccggacgtattgggcgggcctgccgcaa
cctgccagggagaatttccgttttctgcaggtatcgaccgatgaggtctacggcgatctg
ggcctgcgggcggggcgttttatcgaaaccagtccgtacgcgccgagctctccgtacgcg
gccagcaaggccggcgccgaccacttggcccgcgcctggcatcgcacgtatggtcttccg
gtcgtggtgaccaacgcgtcgaacaattacggcccgtgccagtttcccgaaaagctgatt
ccgctgatgctggtgtcggcgttgcgagggtggccgctgaccatctacggggcaggggat
caagtgcgcgactggatctacgtggaagaccatgcccgggcgctatgcgcggcgctgcgt
cttggtcggcccgggcaaacctataacatcggtggctcctgtgagttgcgcaatctggag
gtcgtgcagcagttgtgcgatctgctgcaggtgctgcgaccgccgaagatggggcattac
cgggatctcatcgcgcacgtggctgaccggcccggacatgaccggcgttacgcgctcgac
agtggcaaggccgccgctgagctgggctggacgccgcgtgaagacttcggcagtggcctg
gccaagacggtggcctggtatctcgacaatcccgagtggatcgcggatgtggaaagcggc
gcttatccggcgcgctggacaggcgcgaacgcttcatga
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