KEGG   Bordetella holmesii ATCC 51541: D560_1300
Entry
D560_1300         CDS       T03052                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho00521  Streptomycin biosynthesis
bho00523  Polyketide sugar unit biosynthesis
bho00525  Acarbose and validamycin biosynthesis
bho00541  Biosynthesis of various nucleotide sugars
bho01100  Metabolic pathways
bho01110  Biosynthesis of secondary metabolites
bho01250  Biosynthesis of nucleotide sugars
Module
bho_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:bho00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    D560_1300 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    D560_1300 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    D560_1300 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    D560_1300 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    D560_1300 (rfbB)
Enzymes [BR:bho01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     D560_1300 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short Sacchrp_dh_NADP KR
Other DBs
NCBI-ProteinID: AHV94143
LinkDB
Position
complement(1226521..1227579)
AA seq 352 aa
MKILITGGAGFIGSALIRHIVRDTQDSVVNVDKLSYAGNLASLQECASHPRHSFERVDIC
DGAALQAVFERHRPDAVMHLAAESHVDRSIDGPGQFIQTNLVGSYVLLEAARTYWAGLPQ
PARENFRFLQVSTDEVYGDLGLRAGRFIETSPYAPSSPYAASKAGADHLARAWHRTYGLP
VVVTNASNNYGPCQFPEKLIPLMLVSALRGWPLTIYGAGDQVRDWIYVEDHARALCAALR
LGRPGQTYNIGGSCELRNLEVVQQLCDLLQVLRPPKMGHYRDLIAHVADRPGHDRRYALD
SGKAAAELGWTPREDFGSGLAKTVAWYLDNPEWIADVESGAYPARWTGANAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaaaatcctgattaccggcggcgccggtttcatcggttcggcgctgattcgccacatc
gtccgtgacacgcaggacagcgtggtcaatgtcgacaagctcagctatgccggcaacctt
gcctccttgcaggaatgcgcctcgcacccccgccacagcttcgagcgtgtggatatctgc
gacggggcggccctgcaggcggtcttcgagcgtcatcgtcccgatgccgtcatgcatctg
gcggcggagtcgcacgtggatcgatccatcgatggtccggggcagttcatacagaccaat
ctggtgggcagttatgtcctgctggaagccgcccggacgtattgggcgggcctgccgcaa
cctgccagggagaatttccgttttctgcaggtatcgaccgatgaggtctacggcgatctg
ggcctgcgggcggggcgttttatcgaaaccagtccgtacgcgccgagctctccgtacgcg
gccagcaaggccggcgccgaccacttggcccgcgcctggcatcgcacgtatggtcttccg
gtcgtggtgaccaacgcgtcgaacaattacggcccgtgccagtttcccgaaaagctgatt
ccgctgatgctggtgtcggcgttgcgagggtggccgctgaccatctacggggcaggggat
caagtgcgcgactggatctacgtggaagaccatgcccgggcgctatgcgcggcgctgcgt
cttggtcggcccgggcaaacctataacatcggtggctcctgtgagttgcgcaatctggag
gtcgtgcagcagttgtgcgatctgctgcaggtgctgcgaccgccgaagatggggcattac
cgggatctcatcgcgcacgtggctgaccggcccggacatgaccggcgttacgcgctcgac
agtggcaaggccgccgctgagctgggctggacgccgcgtgaagacttcggcagtggcctg
gccaagacggtggcctggtatctcgacaatcccgagtggatcgcggatgtggaaagcggc
gcttatccggcgcgctggacaggcgcgaacgcttcatga

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