Bordetella holmesii ATCC 51541: D560_1339
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Entry
D560_1339 CDS
T03052
Symbol
topB
Name
(GenBank) DNA topoisomerase III family protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bho03032
]
D560_1339 (topB)
Enzymes [BR:
bho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D560_1339 (topB)
DNA replication proteins [BR:
bho03032
]
Prokaryotic type
DNA Topoisomerases
D560_1339 (topB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Cas12f1-like_TNB
Zn_ribbon_FGT1_2
HypA
HVO_0758
Motif
Other DBs
NCBI-ProteinID:
AHV94376
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Position
1267196..1269832
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AA seq
878 aa
AA seq
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MNKTLIIAEKPSVALDISRALGGFAREGDYFESERYVLASSIGHLLSLVAPNDPVKGKWS
FTHLPVIPPAFELGPTDKKSAERLKLLVRLAKRKDVDAIINACDAGREGELIFRYIIQYA
GVKKPIQRLWLQSMTQAAIREAFENLRDDVQLKPLEAAARSRAEADWLVGINGTRAMTAF
NSKDGGFFKTPVGRVQTPTLAIVAERENRIRSFVSRDYWEVHATFVAAAGLYEGRWIDPD
FKKDERDPEKRESRLWSQAAAQSVVAACRAQSGQVTEESKPSTQMSPALYDLTSLQREAN
GRFGFSAKTTLALAQTLYERHKALTYPRTDSRYLPEDYLNTVRQTMRALAEGGSHAVGGL
SRHAGTVVSNDWVKPNRRIFDNKKVSDHFAIIPTLQIPHDLSEAEGKIYDLVLKRFLAVF
FPAAEYRVTTRLTQVQGHRFKTDGKVLVSPGWLAVYGKEAQGEDANLVPVADGETVRTEE
VRAEALATKPPARYNEATLLSAMEGAGKLVDDEELREAMSERGLGTPATRAAIIEGLLNE
SYLRREGRELVPTAKARQLMTLLSGLDVTELTSPELTGEWEHKLKQIEQGGLNREAFMRE
IAQMTQVIVKRAKEYERDTVPGDYATLQTPCPKCGGVVKENYRRFACTQCDFSISKHPGG
RTFELPEVEELLAKREIGPLQGFISKMGRPFAAILRISDEYKLEFDFGQNDEDDNEPVDF
SGHTPVGACPKCSARVFEHGMSYVCEKSVGPQKTCDFRSGKVILQQEISREQMSKLLADG
RSDLLDGFVSSRTNRKFKAFLVRQPDGKIGFEFEPRGDKPARGAAKTAGKTAAKTATKTA
TKTAAKTAAKKAPAKKTAVKKTATKTAVKKAAAKKTAG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacgctgatcattgccgagaaaccctcggtagcactggatatatcacgcgcc
ctgggaggctttgcgcgcgaaggtgactattttgaaagcgaacgttacgtactggcttcc
agtatcgggcatttgctcagtctggtggcacccaacgacccggtcaagggtaaatggagt
ttcacccacctgccggtgatccccccggccttcgaactggggccgacggacaagaaatcc
gccgagcgcctcaagctgctcgtgcggctggccaaacgcaaagatgtggatgccatcatc
aatgcgtgtgacgcgggccgcgagggcgaattgatctttcgctacatcatccagtacgcc
ggtgtaaaaaaacccatccagcgtctgtggttgcaatccatgacccaggcggccatccgt
gaggcgttcgagaatctgcgcgacgacgtgcaactcaagccgctggaggccgctgcccgc
tcgcgcgccgaggccgactggctggtgggcatcaacggcacgcgcgccatgacggccttc
aacagcaaggacggcggctttttcaagaccccggtcggccgcgtgcaaacgccgacactg
gccatcgttgccgagcgcgaaaatcgcatccgcagcttcgtctcgcgtgactactgggag
gtgcacgccaccttcgtggccgccgccgggctgtacgaagggcgctggatcgatccggac
ttcaagaaggacgagcgcgaccccgaaaagcgtgaatcccgcctgtggtcgcaggccgcc
gcacaaagtgtcgtggccgcttgccgcgcgcaatccggccaggtaaccgaggagtccaag
ccttcgacccagatgtcgccggcgctctacgatctgacctccttgcagcgcgaggccaac
ggccgtttcggcttctcggccaagaccacgctggccctggctcagacgctttacgagcgg
cacaaagccctgacgtatccgcgtaccgattcccgctatctgcccgaggattacctcaac
accgtgcggcaaaccatgcgtgccctggccgaaggcggctcgcacgccgtcggcggcttg
tcgcgccatgccggcacggtggtcagcaacgactgggtcaagcccaatcgccgcatcttc
gacaacaagaaggtgtcggatcactttgccatcattccgacgctgcagatcccgcatgat
ctgagcgaggccgaaggcaagatttacgacctggtcctcaagcgctttctggccgtgttc
ttcccggctgccgaataccgggtcaccacccgcctgacgcaagtgcagggccaccgcttc
aaaaccgacggcaaggtcctcgtgtcgcccggctggctggccgtctatggcaaggaagct
cagggcgaagacgccaatctggtgccggtagccgacggggaaaccgtacgtaccgaagag
gtgcgcgccgaggcgctggccaccaagccgccggcacgctacaacgaagccacgctgcta
tcggccatggaaggcgcgggcaagctggtcgacgacgaagagttgcgcgaagccatgtcc
gagcgcggtctgggtacgccagcgacccgcgcggccatcatcgaaggcctgctcaacgaa
agctatctgcgacgcgaaggccgtgagctggtgcccacggccaaagcacgccagctcatg
acactgctctcgggtctggacgtcaccgaactgacctcgcccgaactgaccggcgaatgg
gagcacaagctcaagcagatcgagcagggcggcctgaaccgcgaagctttcatgcgcgaa
atcgcgcaaatgacgcaggtcatcgtcaagcgcgccaaggaatacgagcgcgataccgtg
cccggcgattacgctactttgcaaacgccatgtccgaaatgcggcggcgtggtcaaggag
aactatcgtcgctttgcctgcacgcaatgcgatttttcgatcagcaagcatccgggcgga
cgcaccttcgaattgcccgaggtcgaagagttgctggccaaacgcgaaatcggtcctctg
caaggcttcatcagcaaaatgggccggccgtttgcggccatcctgcgcatcagcgatgaa
tacaaactcgagttcgactttggccagaacgacgaagacgacaacgagccggtggatttc
agcggccatacgcctgtcggcgcgtgcccgaagtgctccgcccgcgtcttcgagcatggc
atgagctatgtctgcgaaaagtccgtcggcccgcagaagacctgcgacttccgctccggc
aaggtcatcctgcaacaggagatctcgcgcgagcaaatgagcaagcttctggctgacggc
cgcagcgatctgctcgacggcttcgtctccagccgcacgaatcgtaagttcaaggccttc
ctcgtgcgccagcctgacggcaagatcggattcgagttcgagccacgcggcgacaagccg
gcgcgtggcgcagccaaaacggcgggcaagacagctgctaagacggctaccaaaacagca
accaaaacggcagccaaaacggcagccaagaaagcgcccgccaagaaaacagccgtcaag
aaaacagccaccaagaccgctgtcaaaaaggcggccgccaagaaaacagccggctga
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