Bordetella holmesii ATCC 51541: D560_1433
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Entry
D560_1433 CDS
T03052
Name
(GenBank) putative substrate binding protein of ABC transporter system
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02010
ABC transporters
bho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D560_1433
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_1433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_1433
Transporters [BR:
bho02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
D560_1433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AHV92121
LinkDB
All DBs
Position
complement(1360473..1361645)
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AA seq
390 aa
AA seq
DB search
MKRILTAVLTSVALAAPAVAADLVVAHVYDKTGPLEAYAKQTHNGLMMGLEYATQGTMAV
AGRKIRVIEKDNQGKPDVARAQLASAYADDNADLAVGPTSSGVALAMLPIAEEYEKILLV
EPAVADSITGEKWNRYIFRTGRNSSQDAVANAAAFDQDGTSIGMLAQDYAFGRDGVRAFK
GALKHAKIVHEEYLPANATDFSGGAQRLFDALKDKPGRKIIFVLWAGAGNPFKIADLDPK
RYGIEIATGGNTLAAMTPLKSLAGMEGATYYYYGIPKNPINDWLVAEHQKRYGQPPDFFT
AGGMSAGIAIVEALKKTAGKSDTDTLIKAMEGMSFETPKGKMTFRPQDHQAMQSMYHFRI
KNDPSVPWAEQELVREITPEQMDVPIQNKR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcctgaccgccgttctgacaagcgtcgcgcttgcagcccccgccgtcgcc
gccgacctggtggtcgcgcatgtgtatgacaagaccggtcccctggaggcctacgccaaa
caaacccacaatggcctgatgatgggcctggagtacgctacccagggcacgatggccgtg
gccggccgcaaaatacgggtgatcgaaaaggacaaccaaggcaagccggatgttgcgcgc
gcgcagctggcttcggcctacgccgatgacaatgccgaccttgccgtgggcccgacctct
tcgggcgtggcactagccatgctgcccattgcggaggagtacgagaaaatcctgctcgtc
gagcccgccgtcgccgactcgattaccggcgagaaatggaaccgctatatctttcgcacc
ggccgtaattcctcgcaggatgccgtggccaatgccgccgccttcgatcaggacggcaca
tccattggaatgctggcacaggactacgccttcggcagagatggtgtgcgcgcgttcaag
ggcgcgctcaagcatgccaagatcgtgcatgaggagtatctgcccgccaacgccaccgac
ttcagtggcggcgcgcaacgcttgttcgacgcgctcaaggacaagccgggccgcaagatc
atctttgtcctttgggcaggagcgggcaatccgttcaagatcgcggacctcgaccccaaa
cgctatggcatagagatcgccactggcggcaacacactggccgccatgacgccgctcaag
agtctggccggaatggaaggcgccacctactactactacggtattccgaagaaccccatt
aacgactggctggtggccgagcatcaaaaacgctatggacagccaccggacttcttcacc
gccggcggaatgtcagcggggatcgccatcgtcgaggctctgaagaagaccgcgggcaag
tcagatacggacacgctcatcaaggccatggaaggaatgagctttgaaacgcccaaaggc
aaaatgacattccgcccgcaggatcatcaggccatgcagtccatgtaccacttccgcatc
aagaacgatccctccgtaccctgggcggagcaggagctggtgcgcgagatcacgcctgag
caaatggatgttcccatccagaacaagcgctga
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