Bordetella holmesii ATCC 51541: D560_1469
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Entry
D560_1469 CDS
T03052
Name
(GenBank) penicillin-binding, 1A family protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00550
Peptidoglycan biosynthesis
bho01100
Metabolic pathways
bho01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D560_1469
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D560_1469
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bho01003
]
D560_1469
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bho01011
]
D560_1469
Enzymes [BR:
bho01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
D560_1469
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D560_1469
Glycosyltransferases [BR:
bho01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
D560_1469
Peptidoglycan biosynthesis and degradation proteins [BR:
bho01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
D560_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
YkpC
Motif
Other DBs
NCBI-ProteinID:
AHV93598
LinkDB
All DBs
Position
complement(1387407..1389800)
Genome browser
AA seq
797 aa
AA seq
DB search
MFLRFLIKTGIFFGGLALCGLVLGGMALALAWPNLPDLHAMTDYRPRVPLRVYTADKVMI
GEFGEERRNVLRFNEIPDVMKSAVLAAEDDRFYQHGGIDWTGVVRAGLTNLINMSKTQGA
STITMQVARNFYLSSEKTYSRKFYELLLTFKIESELTKDQILELYMNQIYLGHRAYGFAA
ASRTYFGKPLSQVTPAEAAMLAGIPKAPSRFNPISNRPRAELRQRYVLGRMYSLGYLTEP
EYKAALAQPIIMKSAEGTPAGGYAVHGEYVAELARQLVYGVYQDDAYSRGINVYTTVSSK
DQEAAYRAVREGVLEYTRRAPYPGPEDQLELPAGVEKDAQALDDFLDGVFDKYSDSGDLM
TAVVLSASPNEIKLARSSREIISITDKKALGVVARALNDKAKPEQRLQRGSVVYIHKYGD
DGNWEVINMPAVQAAFVALSPQDGAIRAMVGGFDFYRGNFNRVTQAWRQPGSNIKPFIYA
ASLERGLTPGTQISDQPFELSAAQTGSKAWHPKNYGNQYEPMLTMRQGLYKSKNMVSIRI
LQAIGPQYAQDYLTRFGFDKARQPAVLPLALGAGSVTPLQLAGAYSVFANGGYRVTPYLI
NQVTDSSGKVLMQARPVIAGDEAARAIDPRTAWVMDDMLRGVATSGTAARARATLKRNDL
AGKTGTTNESVDAWFSGYTPNLVATAWLGFDQPKSLGSRETGGGVAMPIWLDYMQEALKG
TPEGKQRPKPDGLLAENGDFYFAEFPPGQAVARLGLTQPGEDALGDFLNGLGDNQNVRTA
PGFGTNSQKPWSQNIQF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcgatttctgatcaagaccggcatattttttggcggtctggccctgtgtggc
ctggtattgggcggcatggcgctagcgctggcctggcccaatctgcccgatctgcacgcg
atgaccgactaccgtcctcgcgtacctttacgcgtctacacggccgacaaggtgatgatc
ggagagttcggcgaagaacgccgcaatgtgctgcgtttcaacgagatcccggatgtcatg
aagtcggccgtgctggccgccgaagacgaccgtttctatcagcatggcgggatcgactgg
accggcgtggtgcgcgccgggctgaccaatctcatcaatatgtccaagacgcagggcgcc
agcaccatcaccatgcaggtcgcgcgcaatttttatctgtcgtccgaaaagacctattca
cgcaagttctatgagctgctgctcaccttcaagatcgagtccgaactcaccaaggaccag
attctcgagctctacatgaaccagatttatctgggtcatcgtgcctacggttttgccgcc
gcctcgcgcacctattttggtaaaccgctgtcgcaggtcacgcccgccgaagccgccatg
ctggcgggcattcccaaggcaccgtcacgcttcaacccgatttccaatcgcccgcgcgcc
gagctgcgtcagcgctatgtcctgggccgcatgtattcgctgggttatctcaccgagccc
gaatacaaggccgcgctggcgcaacccatcatcatgaaatcggccgaaggcaccccggcc
ggcggctatgccgtgcatggcgaatacgtggccgagctggcgcgccaattggtctacggc
gtctaccaggacgacgcgtattcgcgcggcatcaacgtctatacaaccgtctcgtccaag
gaccaggaagcggcctaccgcgccgtgcgcgaaggtgtgctggaatacacccggcgcgcg
ccttatcccggcccggaggatcagctcgagctgccggcgggagtcgagaaagacgcgcaa
gcgctggacgacttcctcgatggcgtattcgacaaatactccgacagcggcgacctgatg
acggcggtggtgctttccgcctcgcccaacgaaatcaagctggcgcgcagttcgcgcgag
atcatctccattaccgacaagaaagccctcggcgtggtcgctcgcgcattgaacgacaag
gccaaacccgagcagcgcttgcaacgcggctccgtggtctacatccacaagtatggcgat
gacggcaattgggaagtcatcaacatgcccgccgtgcaggcggccttcgtcgcgctgtcc
cctcaggatggtgcgatccgcgccatggttggcggctttgatttctatcgcggcaacttc
aaccgcgtcacccaggcctggcgccaacccggctcaaatatcaagcccttcatctacgcc
gcctcgctggagcgcggcctgaccccgggcacgcagatttccgatcagccttttgaactc
tcggcagcccagaccggctcgaaagcctggcatcccaagaactacggcaatcagtacgag
cccatgctgaccatgcgtcagggcctctacaagtccaaaaacatggtgtccattcgcata
ctgcaggccatcgggcctcagtacgcccaggactatctgacacgttttggctttgacaaa
gcgcgtcaacccgccgtcttgcccctggcactgggcgctgggtcggtcacaccgctgcaa
ctggccggggcctattccgtcttcgccaatggcggctatcgcgtaacaccctatctgatc
aatcaggtcaccgacagcagcggcaaagtgctcatgcaagcccgtcctgtcatcgccggc
gacgaagccgcacgcgccatcgatcctcgcacggcctgggtgatggacgacatgctgcgc
ggcgtggcgaccagtggcactgccgcgcgtgctcgtgccaccctcaagcgcaacgatctg
gcgggcaagaccggcaccaccaacgaatccgtcgacgcctggttctccggctatacgccc
aatctggtggccacggcctggctgggctttgaccaacccaagtccctgggttcgcgcgaa
accggcggcggggtagccatgccgatctggctcgattacatgcaggaagccctcaaaggc
acacctgaaggcaagcaacggcccaagcccgatggcctgctggctgaaaacggcgatttc
tactttgcggaattcccgcccgggcaggcggtggcccgcctgggactgacgcaaccgggt
gaggatgcgctgggcgacttcctcaatgggctgggcgacaaccagaatgtgcggaccgct
ccgggctttggcaccaactcgcaaaagccctggtcgcaaaacatccagttctga
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