Bordetella holmesii ATCC 51541: D560_1631
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Entry
D560_1631 CDS
T03052
Name
(GenBank) tonB-dependent Receptor Plug domain protein
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_1631
Transporters [BR:
bho02000
]
Other transporters
Pores ion channels [TC:
1
]
D560_1631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
STN
DUF7013
Motif
Other DBs
NCBI-ProteinID:
AHV91987
LinkDB
All DBs
Position
complement(1533775..1535343)
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AA seq
522 aa
AA seq
DB search
MSRFRIRPAPLAVSIALLFGAATVQAQSADTVEISIPAQPLALALDALARQAKLELMVQP
TLIAAKSAPALQGRYTAREAFERLLAGSGLRAEIEDGLVTIYPVGRGDVTLEPVLVTGLT
SLSATTEGTESYTSLVTTIGKGTQSLKDIPQAISVVTRERMDEQGMTSIYDALANTTGIT
LQQSPQLGKYVFSRGFRNTWYQYDGVPLERGAYGRASNYTGGTAIYDRVEVLRGASGLLQ
GGGEPSGAVNFVRKRVLAEPGFSVTTTAGMWNRFGTQLDGGGTLNEEDTLRGRAVVDVEK
AGSFIDHVNSTNQTYYGTLEYDITPLTQVSLGLAYEVTDGTPNVRGLPSYSNGKTLDVVR
SFSMEPSWNKRHSTTQTTYFDLTHRFNDNWQGKITAVNMRERLNMKFASSVAEVDPSNNF
GAMYAETTRNDIKIGGIDANLIGKIDAFGLQHELLVGANYARNTIATDYGGLSNYYVGDI
FNIPNLREPSQKRWTTALSNTATARASNTVFTRPPTCNWPSR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcttccgcatccggccagctcccttggccgtcagcatcgccttgctgtttggc
gctgccacggttcaagcccaatccgcggacaccgtcgagatcagtattccggcgcaaccg
ctggcgctggcgctggacgcgctggcccgccaggccaagctggagctgatggtgcagccg
accttgatcgccgccaaatcggcgccggcgctgcaaggccgctacaccgcacgcgaagcc
tttgagcgccttctggccggttcgggcttgcgtgccgagatcgaagatggcctggtcacc
atctatccggtagggcgtggcgatgtgacgctggaaccggtactggtcaccggcctgacg
tcgctgagcgccaccaccgaaggcacggagtcgtatacctcgctggtaaccaccataggc
aagggcacgcaatcgctgaaagacattccgcaggccatcagcgtggtcacgcgtgagcgg
atggacgagcagggcatgacgtcgatctatgacgccctggccaacaccaccggcattaca
ctgcagcaaagcccgcagctcggcaaatatgttttttcgcgcggctttcgcaacacctgg
taccagtatgacggtgttccgctagaacgtggcgcctacggccgcgccagcaattacacc
ggcggtacagccatctatgaccgggtagaagtgctgcgcggcgcctccggtttgctgcaa
ggcggcggcgagcccagcggcgccgtcaacttcgtgcgcaagcgtgtgctggccgagccg
ggcttcagtgtcaccaccacggccggcatgtggaatcgctttggcacccagctcgatggc
ggcggtacgctcaatgaagaggacacgctgcgcggacgtgcggtggtggatgtcgagaag
gccggctccttcattgaccacgtcaacagcaccaaccagacctattacggcacgctggag
tacgacatcacgccgctgacccaggtcagcctgggtctggcctatgaggtcactgacggc
acgcccaatgtgcgcggtcttccgtcgtacagcaatggaaaaacactcgacgtggtgcgt
tcgttctccatggagcccagctggaacaagcgccactccaccacgcagaccacctacttt
gatctgacgcaccgcttcaatgacaactggcagggcaagatcacggcggtcaatatgcgt
gaacgcctgaacatgaagttcgccagttcggtcgccgaagtggaccccagtaataacttc
ggcgctatgtacgctgaaaccacgcgcaatgacatcaaaatcggcggtatcgacgccaac
ctgatcggcaagatcgacgcctttggtctgcagcatgagctgctcgtgggcgccaactac
gctcgcaacaccatcgccaccgattacggcggcctgtcgaattactacgtgggcgatatt
ttcaatatccccaatctgcgcgagcccagccagaagagatggacgacagctctctcgaac
accgcgacggcaagagcgagcaatacggtgtttacacggccgcccacctgcaactggccc
agccgttga
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