Bordetella holmesii ATCC 51541: D560_1759
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Entry
D560_1759 CDS
T03052
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D560_1759 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_1759 (priA)
Enzymes [BR:
bho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D560_1759 (priA)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D560_1759 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_16
zinc-ribbons_6
AAA_22
HypA
Motif
Other DBs
NCBI-ProteinID:
AHV94192
LinkDB
All DBs
Position
1651745..1653742
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AA seq
665 aa
AA seq
DB search
MPASLSGEAVLEPGSRVIVPFGRRKLIGVVLELPEQPAIDAAQVREIEQVLQDLPPLPAD
WIRLAQFAAEYYQRPLGEVMLPVLPPPLRKPSAYQGKRSGAGPVARLDARKPRAAALPVA
PDTAPALNDAQAAAVTTIGSISGFKTVLLHGVTGSGKTEVYLHAAQAALAAGRQVLLLVP
EINLTPQLETALRARLEALIGQDGLAVLHSGLSDGERLQAWARVQRGQARMLLGTRMAIF
APMPDLGLIVVDEEHDASYKQQEGLRYSARDLAVWRGHERRIPVVLGSATPSLESWHHAQ
RGQYQLLTLAHRARAAELPRMRLIDTRRLPMKHGLSPQLIDGITERLARGEQALVFLNRR
GYAPVLHCASCGWVTHCPRCSAFTVLHRGGAKGGYRLHCHHCGYQGPVPRACPDCGDQDL
QPMGRGTQRIEEHLAELFPQARIARIDADSTRRKGSAQALFASVHAGEVDILVGTQMVAK
GHDFSRLGLVGVLNADSMLFAQDFRAPERLFAQLMQVAGRAGRHVGGGEVLIQTGYPEQT
VYQALIRHDYAGFARHSLEEREVTGLPPFAYQALLTSEAREVAQALEFLQAARQAGESLS
TAITLYDPVPLRIVRVANVERAQLLVESASRPVLQAFLPYWLDAIAPLAARLRARWQLEV
DPLEI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcctccctgagcggcgaggcggtgctcgagccgggcagccgcgtcatcgtgcct
ttcggccgccgcaaactgattggcgtcgtcctggagctgcccgagcagcccgccatcgac
gcggcgcaagtgcgcgaaattgaacaggtcctgcaggaccttccccccttgcccgccgac
tggatacgcctggcgcaatttgccgccgagtattaccagcggccgctgggtgaggtcatg
ttgccggtgctgccgcctccgttgcgcaagccctctgcctaccagggcaagcgttcgggc
gccgggccagtggcgcgcctggatgcgcgtaaaccgcgcgcggccgccttgccggttgcg
ccagataccgcgcccgccctgaacgacgcgcaagctgcggccgtcaccacgatcggcagc
atcagcggtttcaagaccgtgctgctgcacggtgtgaccggcagcggcaagacggaggtc
tatctgcacgccgctcaagcggcgttggccgccggcagacaggtgctgctgctggtgccc
gaaatcaacctcacgccccaactggagacggccttgcgtgcccgattggaggcgttgatc
ggccaggacggactggcggtgctgcacagcgggctttccgacggcgaacgactgcaggca
tgggcgcgggtgcagcgcggtcaagcacgaatgctgctgggcacgcgcatggcgattttt
gcgcccatgccggatttgggactgatcgtggtcgatgaggagcatgacgcctcttacaaa
cagcaagagggattgcggtattcggcgcgcgatctggcggtctggcgcgggcacgaacgc
cgtattcccgtcgtgttgggctcagccacgccgtcgctggagagctggcatcacgcccaa
cgcggccagtatcaactgttgacgttggcgcatcgcgcgcgcgctgccgagctgccgcgt
atgcgtctgatcgatacacggcgtttgcccatgaagcacgggctgtcgccgcaactgatc
gacggaatcaccgagcgcctggcgcgcggcgagcaggcgctggtgtttctcaaccggcgt
ggttatgcacccgtattgcactgcgcgtcctgcggctgggtgacacattgcccgcgttgc
tcggccttcacggtgctgcatcgagggggggccaagggcggttatcgcctgcattgccac
cattgtggctatcagggcccggtgccacgtgcctgcccggattgcggcgaccaggatctg
caacccatggggcggggcacacaacgtattgaagagcatctggccgaactctttccgcag
gcgcgcatagcccgcatcgacgctgacagtacgcgccgcaagggtagcgcgcaggcgttg
tttgcctcggtccatgcgggcgaggtcgacatcctcgtgggcactcagatggtcgccaag
gggcacgatttttcccgactcggtctggtcggggtgctgaacgcggactcgatgctcttt
gctcaggattttcgggccccggagcgtcttttcgcacaattgatgcaggtggccggtcgt
gccgggcggcatgtgggcggcggtgaggtgctcatccagacgggctaccccgaacagacg
gtctatcaagcattgatccggcatgattacgcgggttttgcccgccattccctcgaagag
cgggaggtcacggggctgccgccttttgcctaccaggcgctgctgacctcggaagcgcgc
gaagtcgctcaggcgctggagtttctgcaggcggcccggcaggccggcgagagcttgagt
acggcgattacactctacgatccggtgccgttacgcattgtgcgcgttgccaatgtggaa
cgtgcccagttgctggtggaaagtgccagccgccccgtgctgcaggcttttctgccgtac
tggctcgacgcgatcgcaccgttggccgcgcgcctgcgcgcgcgctggcaactggaggtt
gaccctctggagatttga
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