KEGG   Bordetella holmesii ATCC 51541: D560_1760
Entry
D560_1760         CDS       T03052                                 
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
bho  Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:bho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bho03400]
    D560_1760
Enzymes [BR:bho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D560_1760
DNA repair and recombination proteins [BR:bho03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D560_1760
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AHV92108
LinkDB
Position
1653785..1655845
AA seq 686 aa
MSTDTPIGHGLNPAQKEAVLYLDGPCLVLAGAGSGKTRVITQKIAYLLRECGYMGRNIVA
LTFTNKAAREMAERVKPLVDRKLAKGLTISTFHALGVRLLREEAAHAGLKQQFSILDADD
AMAIIQDLLATTDRGRLCEVQSIISLWKNGLIEPDEAANVAVTPSEVEAVAVYRSYAATL
AAYQAVDFDDLIRIPAKLLEHNEEVRTRWQNRVRYLLVDEYQDTNVCQYRLVQLLTGMRS
LFTAVGDDDQAIYAWRGATIENLAKLTTDYPNLKLIKLEQNYRSVQRILAAANNVIERNP
KLFEKKLWSDLGAGEPITVSPMDGDQHEAESVAMKVSASRFERQAQWKDFAILYRSNHQS
RILEQALRNLKIPYTISGGQSFFDKAEVRDILAYRRLVANDEDDPAFIRAATTPKRGIGQ
ATLQTLGQYAAQRAISLLEASAEEGLEALLQPRQLEPLRTFGEFIRRIQWRAGRGAHGAT
TRAAEPAGALLEDLFAAIQYERYLFDTLEERPAQTRWQNVMELVAWLKRKADEDGMTLFE
LVQHVALVTMLERGDDEEPDAVKLSTLHASKGLEYPHVYLVGVEEGLLPHGGRDEEDTDP
DNAANNLATRIQEERRLMYVGITRAQRSLHLSWCRKRRRAREDRVCEPSLFIEEMGLSQP
GIKEDAATAALSPKERLGMLKALLQK
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgtccactgataccccgatcggccacggcctgaatcctgcccagaaagaggccgtgctt
tatctggacgggccttgcctggtgctggctggggcaggcagtggcaagacgcgcgtgatt
acgcagaagatcgcctatctgctgcgcgaatgtgggtacatggggcgcaacatcgtggcg
ctgaccttcaccaacaaggccgcgcgcgaaatggccgaacgggtcaagccgctggtggac
cgaaaattggccaaagggctgaccatcagcacgttccatgccttgggcgtgcgcctgctg
cgtgaagaggccgcgcatgcgggtctcaagcagcagttctcgattctggatgcggatgac
gccatggccatcatccaggacctgctggccacgacggaccggggccgtttgtgcgaagtc
cagtccatcatttcgttgtggaaaaatgggctgatcgagcccgatgaagcggccaacgta
gccgtcacgccgagcgaggtcgaggcggtggccgtataccgcagctacgcggcgacgctg
gctgcctaccaggcggtggatttcgatgatctgatccgtattcccgccaagctgctggag
cacaacgaggaggtgcgtacccgctggcagaatcgtgtgcgctatctgctggtcgatgag
tatcaggacaccaatgtttgccaataccgcctggtgcagttgctcaccggtatgcgctcg
ttgttcaccgccgtcggcgatgacgatcaggccatttatgcgtggcggggtgcaaccatc
gagaacctggccaagctcacgaccgactatcccaacctcaagctcatcaagctggagcag
aactaccgttcggtgcagcgcattctggccgcggccaataatgtgatcgaacgcaatccc
aagttgttcgagaagaagctctggtcggatctcggcgccggcgagccgatcacggtcagc
cccatggacggcgaccagcatgaggccgagtcggtggcgatgaaggtctcggcctcgcga
ttcgaacgacaggcgcaatggaaggatttcgccatcctctatcgcagtaatcatcagtcg
cgcattctcgagcaggcgctgcgcaatctgaagatcccttacaccatctcgggcgggcag
agctttttcgacaaggccgaggtgcgtgacattctggcctatcggcgtctggtggccaac
gatgaggatgatccggccttcattcgtgctgccacaacgcccaagcgcggaatcggccag
gcgaccttgcagaccctggggcagtacgcggcgcagcgtgccatctccctgctggaggcc
tctgccgaagaggggctggaggcgctgttgcagccccggcagctcgaacccctgcgcacc
tttggcgagttcatccggcgtatccagtggcgtgccgggcgcggtgcgcacggcgcgacc
acgcgcgcggccgagccggcaggcgccctgctggaagacctgtttgccgccattcaatat
gagcgctacctctttgacaccttggaggagcgcccggcgcagacacgctggcagaacgtg
atggagcttgtcgcctggctcaagcgcaaagccgatgaagacggcatgaccctgttcgaa
ctggtccagcatgttgcgctggtcacgatgctcgaacgcggcgacgatgaagagcccgac
gcggtcaaactgtccaccctgcatgcctccaaaggtctggagtatccccacgtgtatctc
gtgggcgtggaggaagggctcttgcctcatggcgggcgggatgaagaggacaccgacccg
gacaatgcagccaacaatctggccacacgcatccaggaagagcgccgcctgatgtatgtc
ggaatcacgcgtgcgcagcgcagtctgcatctgagctggtgccgcaaacggcgccgcgcg
cgcgaggaccgcgtctgcgagccctcactcttcatcgaggagatgggcctgtctcagccc
ggtatcaaagaggacgcggcgaccgccgccttgagccccaaggagcgcctgggcatgctc
aaggccttattgcagaaataa

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