Bordetella holmesii ATCC 51541: D560_1835
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Entry
D560_1835 CDS
T03052
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00541
Biosynthesis of various nucleotide sugars
bho01100
Metabolic pathways
bho01250
Biosynthesis of nucleotide sugars
Module
bho_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D560_1835
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bho01005
]
D560_1835
Enzymes [BR:
bho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
D560_1835
Lipopolysaccharide biosynthesis proteins [BR:
bho01005
]
Lipid A
D560_1835
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Gene cluster
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD
HAD_2
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
AHV94015
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Position
complement(1721946..1722467)
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AA seq
173 aa
AA seq
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MLARIPAPVRERATAVRLMVFDVDGVLTDGSLYFGEHGEMFKRFNALDGHGLRLLMESGI
RVALITGRSGPVVDRRAAELGISEVLQGIRDKGAALTELAQRQGVQLDQTGYMGDDIIDL
PAMHRAGFAASVHNAPAYVTQAAHWVSALPGAVVRCANAAICCWPPRAAWPLF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcccgtatcccggccccggtccgagagcgcgccaccgccgtgcgcctgatggtc
ttcgacgtcgacggcgtactgaccgacggcagcctgtatttcggcgagcatggtgaaatg
ttcaagcgcttcaacgccctggacggacatggcctgcggctgctgatggaaagcggcatc
cgggtcgcgctgatcacgggccgctcgggccccgtggtcgaccggcgcgccgccgaactc
gggatctccgaggtgttgcagggcatacgcgacaagggcgcggccctgactgaacttgcc
cagcgccagggcgtccaactggatcagaccggttatatgggggacgatatcatcgacctg
cccgccatgcaccgcgccggctttgccgccagcgtacacaatgcccccgcctacgtgacg
caggccgctcactgggtttcggccttgccgggggcagtggtgcggtgcgcgaatgctgcg
atctgctgttggccgcccagggccgcctggccgcttttctga
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