Bordetella holmesii ATCC 51541: D560_1939
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Entry
D560_1939 CDS
T03052
Name
(GenBank) periplasmic binding domain protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02010
ABC transporters
bho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D560_1939
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_1939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_1939
Transporters [BR:
bho02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
D560_1939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
HTH_AT3G52170
Motif
Other DBs
NCBI-ProteinID:
AHV92731
LinkDB
All DBs
Position
1821878..1822837
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AA seq
319 aa
AA seq
DB search
MGGNPDQARQLVTRYLQRDKIDFFTGPIGSNVALAVGPALFAAKVPYLSNNPGPSQFAGS
QCNRYWFGQSYQNDAFHETAGKVAADRGFKKVFIMAPDYPAGKDALTGFKRGYKNAVGEE
LYTKLGQLDYAAEIAQIRAAKPDAVYIFLPGGMGINFVKQFVSSGLAQGTALIGPGFSAD
EDVIQAVGEPMLGMYNTAQWAHDLDNAQNKQFVEAFRKEYNGRYPSVYAAQAYDVIMAMD
AAVKQAGGKASDRDAVVAALQKADFSSVRGPFTYGKNHYPILSYYVRVVDKDGNGRITNK
LAGKVFDNYQDVYVGECKL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaaatcccgatcaggcccggcagctcgtcacgcgttatctgcaacgcgacaaa
atcgatttctttaccggtccgatcggctcgaacgttgcgctggccgttggcccggcgctg
tttgccgccaaggtcccgtatctgtcgaacaatcccggccccagccagtttgccggctcg
caatgcaatcgctactggtttggacagtcctaccagaacgatgccttccatgagacggca
ggaaaagtcgccgccgaccgcggcttcaagaaggtattcatcatggcgccggactatccg
gccggcaaggatgcgctgaccggtttcaagcgcggctacaagaacgcggtgggcgaagag
ctctacaccaagttgggccagctggactatgccgccgaaatcgcgcagatccgtgcggcc
aagccggatgcggtctacatcttcttgcccggcgggatgggaatcaacttcgtcaagcaa
ttcgtctcgtcaggattggcccagggcacggccctgatcggcccgggcttttctgccgac
gaggacgtgatccaggccgtgggcgaacccatgctcggcatgtacaacacggcgcaatgg
gctcacgacctcgacaatgcgcagaacaagcaattcgtcgaggcgttccgcaaggaatac
aacgggcgttatccctcggtgtatgccgcccaggcctatgacgtcatcatggcgatggac
gccgcagtcaagcaggccggcggcaaggccagcgatcgtgatgcggtggttgccgccctg
cagaaagccgatttctcttccgtgcgcggtcccttcacttacggcaagaaccactatccc
atcctgtcttactacgtgcgcgtggtcgacaaggatggcaatggccgcattaccaacaaa
ctcgccggaaaggtgttcgacaactaccaggacgtctacgtcggcgagtgcaagctgtaa
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