Bordetella holmesii ATCC 51541: D560_2170
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Entry
D560_2170 CDS
T03052
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00470
D-Amino acid metabolism
bho00550
Peptidoglycan biosynthesis
bho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D560_2170 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D560_2170 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bho01011
]
D560_2170 (murD)
Enzymes [BR:
bho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
D560_2170 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bho01011
]
Precursor biosynthesis
Amino acid ligase
D560_2170 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
AHV94138
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Position
2027705..2029078
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AA seq
457 aa
AA seq
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MALREADVQYHLGCASQFDEALLDGVSQLVLSPGLSPGQEPAASLLRAAATRGVEVVGEI
ELFARALARLAEARDYRPRVLAVTGTNGKTTVTALTRQLIEASGLSVRAAGNISPAALTA
LMEALDQDQLPDVWVLELSSFQLETTRSLSADAAVVLNVTQDHLDWHGSMQAYSQAKARL
LTMACVAIVNRDDPLTTAMVSDLKGLNARSFGRDLPQWVGDMGLELGQGVSWLVACEPSD
FDDQAAPVRRKKDAPPPVRNAGRMSRLMPVDALRIRGVHNALNALAALQLARVLELGWGA
LLRALREYAGEPHRAAFVRNVGGVDYINDSKGTNVGATVAALEGLGQSVVLIAGGQGKGQ
DFSPLRAVVARHARAVVLIGVDGPAIGDILADTGVVLVQAQDMREAVRRSAELAQAGDAV
LLSPACASLDMFRNYPHRGEVFAQEVDELARDQGEVA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgcgcgaggctgacgtccaataccatctgggctgcgccagtcagttcgatgaa
gcgctgctcgatggcgtctcgcaactcgtgctcagcccagggctgtcgccgggacaggag
cctgcggcaagcctgctcagggccgccgccacacgtggcgtcgaggtcgtaggcgagatc
gaactgtttgcgcgcgcgttggctcgtttggctgaggcacgcgactaccggccacgcgtg
ctggccgtgactggcaccaatggcaaaaccacggtgacggcactgacccggcagttgatc
gaggccagtggcctgagcgtgcgtgcggcaggcaatatcagcccggctgcgctgaccgcg
ctcatggaggctctggatcaagaccagctgcctgacgtctgggtgctggagctttccagc
ttccagttggaaaccacccgcagtctgagcgcggatgctgccgtggtgctcaatgtcacc
caggatcatctggattggcacggcagcatgcaggcctactcgcaagccaaggcccgcctg
ctgacgatggcgtgtgtggcgattgtcaatcgcgatgaccccctgaccaccgcgatggtc
agcgacctcaagggcctgaacgcgcgcagcttcgggcgtgatctgccgcaatgggtcggt
gatatgggcctggagctcgggcagggcgtgtcctggctggtggcttgcgagccaagcgac
ttcgacgatcaggccgcgcccgtgcgccgcaaaaaggacgcgccgccgcctgtgcgcaat
gctggccgcatgagccgcttgatgccggtcgatgccttgcgcatccgtggcgtgcacaac
gcgctcaatgctctggcggcgttgcaactggcacgggtgctcgagctgggctggggagcc
ttgctgcgcgcgttgcgcgagtatgccggcgagccgcaccgtgcggcctttgtgcgcaac
gtaggcggcgttgattacatcaatgacagtaagggcaccaatgttggcgccacggtggct
gccctcgaagggttgggtcagagcgtagtgctgattgccggcgggcagggcaaaggacag
gatttctctcccttgcgggccgtcgttgcccggcatgcccgtgccgtcgtgttgattggt
gtcgacggcccggccattggcgacatactggccgacaccggcgtggtcttggtccaggct
caggacatgcgcgaggccgtgcgccgctctgccgaactggcgcaagccggtgatgccgtg
ctgctgtcgccggcctgcgccagcctggatatgttccgcaactatcctcatcgcggcgaa
gtcttcgcgcaagaggtcgatgagttggcccgcgatcagggagaggtggcatga
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