KEGG   Bordetella holmesii ATCC 51541: D560_2323
Entry
D560_2323         CDS       T03052                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bho00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    D560_2323 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bho03019]
    D560_2323 (rnc)
   03009 Ribosome biogenesis [BR:bho03009]
    D560_2323 (rnc)
   03036 Chromosome and associated proteins [BR:bho03036]
    D560_2323 (rnc)
Enzymes [BR:bho01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     D560_2323 (rnc)
Messenger RNA biogenesis [BR:bho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D560_2323 (rnc)
Ribosome biogenesis [BR:bho03009]
 Eukaryotic type
  90S particles
   RNase
    D560_2323 (rnc)
 Prokaryotic type
  rRNA processing factors
   D560_2323 (rnc)
Chromosome and associated proteins [BR:bho03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     D560_2323 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AHV92775
LinkDB
Position
2171193..2171948
AA seq 251 aa
MSLATLETRLGHHFGDQALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYAKL
DEGDLSRVRANLVKQASLADIAQRLDLSLYLRLGEGELKSGGFRRPSILADTVEALFGAV
FLDAGFAAARTVIERQYDPVLASVDPQTLGKDAKTLLQEFLQGRKMALPIYTVVATHGAA
HSQQFEVECAIPALEIKVTAGGASRRAAEQSAAKLALEAAQAVSPRVARKGGRARKTAQL
SLPVAVAQEVK
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtccttagccacgctggaaacccgcctcggtcatcattttggcgatcaggcattgctt
gagcaggcgctcacgcaccgtagccacggtgcgcgccacaacgagcgcctggagtttctc
ggcgactccgtactgaacttcgtcgtcgccgccatgctgttcgagcgttatgccaagctg
gacgaaggcgatttgtcgcgcgtgcgcgccaacctcgtcaagcaggcgtcgctggccgat
atcgcgcagcgcctcgatttgtcgctttatctgcgtctcggagaaggcgagttgaagagc
ggaggatttcgacgcccgtccatccttgccgacacggtcgaggcattgtttggcgccgtg
tttctcgacgccgggttcgccgcagcgcgtacggtgatcgagcgccagtacgacccggtg
ctcgccagcgtcgatccgcagacccttggcaaggacgccaagacgctgctgcaggagttc
ttgcagggccgtaagatggccttgcccatttacaccgtggtcgctacgcacggggccgcg
cacagtcagcagttcgaggtggagtgcgctattccagctctcgaaatcaaggtgacggcc
ggtggcgcaagccgccgtgccgccgaacaatccgccgccaagctggccctggaggccgcc
caggcggtcagtccgcgagtcgcgcgcaaaggcggccgcgcgcgcaagacggcacaactg
tcgctgccggtggcagtggctcaagaggttaaatga

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