Bordetella holmesii ATCC 51541: D560_2488
Help
Entry
D560_2488 CDS
T03052
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
D560_2488 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bho03011
]
D560_2488 (rpsA)
Ribosome [BR:
bho03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
D560_2488 (rpsA)
Bacteria
D560_2488 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AHV93193
LinkDB
All DBs
Position
2331957..2333669
Genome browser
AA seq
570 aa
AA seq
DB search
MSSVSTPAFGGESFADLFAESLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLE
EFLNDLGELEVQPGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGT
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYG
AFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQ
NPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTETGEEAVRNFKK
GDELEAVVLGIDTEKERISLGIKQLEGDPFNNFVATYDKGAVVPGTIKSVEPKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLTAGANIEAMIINIDRKARSVQLSVKARDSAETAETI
QRMSDASASSGTTNLGALLKAKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccactcccgccttcggcggcgaaagctttgccgacctgtttgccgag
agcctcaagagccaggacatgaagtccggcgaggtcatcagcgctgaagtcgttcgcgtc
gatcacaatttcgtggtcgtgaacgccggcctgaagtccgaggcgctgatccccctggaa
gagttcttgaacgacctgggcgagctcgaagtacaacccggcgatttcgtctccgtggcg
atcgattcgctggaaaacggctacggcgacaccattctgtcgcgtgaccgcgccaagcgc
ctgtcggcctggctgcaactcgaaaaggccctggaaaatggcgagctggtcaccggcacc
atcacgggcaaggtcaagggcggcctgaccgtcatgaccaacggcatccgcgccttcctg
ccgggttcgctggttgatctgcgtccggtcaaggacaccaccccctacgagggcaagacc
ctcgagttcaaggtcatcaagctcgatcgcaagcgcaacaacgttgtgctgtcgcgccgc
caggtgctggaagccagcatgggcgaagagcgccagaagctgctcgagacgctgcacgaa
ggtgccgtggtcaagggcgtggttaagaacatcaccgattacggcgcgttcgtggacctg
ggcggtatcgacggcctgctgcatatcaccgacatggcatggcgccgtgtgcgtcacccc
tccgaagtcctgcaagtgggtcaggaagtcgaagccaaggtcctcaagttcgaccaggaa
aagagccgcgtgtcgctgggcgtcaagcaactgggcgaagatccgtgggtgggcctggct
cgccgctacccgcaaggcacccgtctgttcggtaaggtgaccaacctgaccgactacggc
gccttcgttgaagtcgaagccggcatcgaaggtctggtgcacgtctccgaaatggactgg
accaacaagaacgtcgatccgcgcaaggttgtcaccctgggcgaagaagtcgaagtcatg
gtcctggagatcgacgaagaccgtcgccgtatctcgctgggcatgaagcagtgccgtcag
aacccgtgggaagagttcgccacgaacttcaagcgcggcgacaaggttcgcggcgccatc
aagtcgatcaccgacttcggcgtgttcgtgggtctgcctggcggtatcgatggcctggtt
cacctgtccgacctgtcgtggacggaaaccggtgaagaagcggttcgcaacttcaagaag
ggcgacgagctcgaagccgtggttctgggtatcgacaccgagaaggaacgcatctcgctg
ggcatcaagcagctggaaggcgatcctttcaacaacttcgttgccacgtacgacaagggt
gctgtggtccccggcacgatcaagtcggtcgagcccaagggtgctgtcgtgaccctgtcg
gtcgacgtcgaaggctacctgcgtgcttccgagatctcctcgggccgcgttgaagatgcc
acgacggttctgaccgccggcgccaacatcgaagccatgatcatcaacatcgatcgcaag
gcgcgttcggtccagttgtcggtcaaggctcgcgatagcgcagagaccgctgaaactatc
cagcgcatgtccgacgccagcgcatcttcgggtacgaccaacctgggcgcgctgctcaag
gccaagctggaccaacagcgcaacgacggttga
DBGET
integrated database retrieval system
