Bordetella holmesii ATCC 51541: D560_2489
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Entry
D560_2489 CDS
T03052
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bho03032
]
D560_2489 (ihfB)
03036 Chromosome and associated proteins [BR:
bho03036
]
D560_2489 (ihfB)
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_2489 (ihfB)
DNA replication proteins [BR:
bho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D560_2489 (ihfB)
Chromosome and associated proteins [BR:
bho03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
D560_2489 (ihfB)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
D560_2489 (ihfB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHV91415
LinkDB
All DBs
Position
2333673..2334032
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AA seq
119 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTVLDAMTQALASGQRIEIRGFGSFSLSQRSPRV
GRNPKSGEQVLVPGKQVPHFKAGKELRERVDLTGNEPGGDSSHESSDPLQSVMDMHAMH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgctctggcggcccgctatccccagctggccgcccgc
gacaccgattacgcggtcaagaccgtgcttgatgcgatgacccaggccctggcctcgggg
cagcgcatcgagattcgcggtttcggcagtttttcgctgtcgcagcggtctccgcgcgtg
gggcgcaatcccaagtcgggtgagcaggtgctggtgcctggtaaacaggtgcctcacttc
aaggccggcaaggagttgcgagagcgtgtggatctgactggtaacgaaccgggtggcgat
tcctcgcatgaatcgtccgaccctctgcagtccgtgatggatatgcatgcaatgcattga
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integrated database retrieval system
