Bordetella holmesii ATCC 51541: D560_2590
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Entry
D560_2590 CDS
T03052
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D560_2590 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_2590 (xseB)
Enzymes [BR:
bho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
D560_2590 (xseB)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D560_2590 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
HBM
Motif
Other DBs
NCBI-ProteinID:
AHV92153
LinkDB
All DBs
Position
2429270..2429506
Genome browser
AA seq
78 aa
AA seq
DB search
MASTSLPQDFETALAELEALVQAMENGSLPLEQSLAAYRRGVELTRICQDRLSQAEQQVK
VLEGELLRPLQPGALDDE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcaacttctctgccgcaagatttcgaaaccgctctggccgagctcgaggcgctc
gtgcaggccatggagaacggttccctgccgctggagcagtcgctggccgcttatcgccgt
ggcgttgaactcacccgtatctgtcaggaccgcctctcgcaggccgaacagcaggtcaag
gtgctcgaaggtgaattgttgcgccccttgcagccgggcgccctggatgacgaatag
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