Bordetella holmesii ATCC 51541: D560_2913
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Entry
D560_2913 CDS
T03052
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_2913 (radA)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D560_2913 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
DnaB_C
GvpD_P-loop
ChlI
AAA_16
DUF7125
Lon_C
Rad51
nSTAND3
NTPase_1
AAA_24
AAA_5
AAA_14
SLFN-g3_helicase
TackOD1
DAP3
AAA_28
HMBD
MCM
Mur_ligase_C
RecA
Zn_ribbon_tTFIIB
AAA
ABC_tran
AAA_29
ZnF_RZ-type
zf-RING_10
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
AHV94262
LinkDB
All DBs
Position
2720565..2721923
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AA seq
452 aa
AA seq
DB search
MAKTRTVYVCAECGGTTLKWQGKCPHCSAWNTLEETVESATPAANHRYAPLASASPVRSL
ADIEARETPRQPTGLDEFDRVLGGGLVEGAVVLIGGDPGIGKSTLLLQALAALSASVAVL
YVTGEESAEQVALRARRLGLQTGQVNLLAEIRLEAIQAAVSQQKPAVAVIDSIQTLYSGE
LTAAPGSVSQVRECAAQLTLLAKQTGIAIVMIGHVTKDGALAGPRVLEHIVDTVLYFEGD
THSSFRLVRAFKNRFGAVNELGVFAMTDRGLRGVANPSALFLSQHQEQVAGSCVMATQEG
TRPMLVEIQALVDSSHAPNPKRLTVGLESNRLAMLLAVMHRHAGVTTHDQDVFVNAVGGV
RITEPAADLPVLLAIMSSLRDRPLPKGLFAFGEIGLAGEIRPAPRGQERLREAAKLGFSI
ALIPKANAPRQPVEGLEIWAVDRLQEALDKLR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacgcgaaccgtctatgtatgcgccgagtgcggcggcaccacgctcaaatgg
cagggcaagtgtccgcattgctcggcctggaatactctcgaagaaaccgtcgagtctgcc
accccggcagccaatcaccgctacgcgccgctggcgtcggccagtcccgtgcgcagtctg
gccgatatcgaagcgcgtgagacgccgcgccagccgaccggcctcgatgagttcgatcgg
gtgctgggcggcgggttggtcgagggcgcggtggtcctcatcggtggcgatccgggcatc
ggtaaatccacgctgctgttgcaggccttggccgccttatcggccagcgtcgccgtgctg
tatgtcacgggcgaagagtccgctgagcaggtcgccctgcgcgcgcgtcgcctgggcttg
cagacagggcaggtcaacttgttggccgagatacggctcgaggcgatccaggcagccgtg
tctcaacaaaagcccgccgtggcggtcatcgactctatccagacactctatagcggcgaa
ctgaccgccgcgccgggctcggtttctcaggtgcgcgaatgcgccgcgcaactgacgctg
ctagccaagcagaccggtatcgccatcgtcatgatcggccatgtcaccaaggacggcgcc
ttggccggtccccgcgtgctggagcacattgtcgacacggtgctctatttcgaaggagat
acccactcttcgttccggctggtacgggcattcaagaaccgcttcggcgcggtcaacgaa
ttgggcgtatttgccatgacagatcgcgggctgcgcggcgtggcgaatccgtcggccttg
tttctgtcccagcatcaggagcaggtggcgggctcctgcgtcatggcgacccaggaaggc
acacgccccatgctggtggaaattcaagccttggtcgatagctcccacgctcccaatccg
aaacgcttgacggtggggctggaaagcaatcgtctggccatgttgctggctgtcatgcac
cgccatgccggcgtgaccacgcatgaccaggatgtcttcgtcaatgccgtgggaggcgtg
cgcattaccgaacccgcggccgatttgcccgttctgctggccatcatgtcatcgttgcgg
gaccggcccctacccaaagggctgttcgcctttggtgaaatcgggctggccggcgagatt
cgtccggccccgcgcggccaggagcgcctgcgcgaggcggccaagctgggcttttccatt
gcgctcatccccaaagccaatgcacctcggcaacccgtcgaggggctggaaatctgggcc
gtcgatcgcctgcaggaagcgttggacaaattgcgctaa
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