Bordetella holmesii ATCC 51541: D560_3038
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Entry
D560_3038 CDS
T03052
Name
(GenBank) RNA methyltransferase, RsmE family protein
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bho03009
]
D560_3038
Enzymes [BR:
bho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
D560_3038
Ribosome biogenesis [BR:
bho03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D560_3038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AHV92465
LinkDB
All DBs
Position
complement(2828309..2829043)
Genome browser
AA seq
244 aa
AA seq
DB search
MSLPRFYCDPPLAAGQRICLPLALAHHAIRVLRLRDGDDIVLFDGQGGEYPARLQIEGKA
GHAQLGEHLPREAELPGRIVLAQGLPSGDKMDWIVEKAVELGAAAVQPIAAQRSVLQLSG
PRLEKRLTHWERVAQAAAEQCGRNRLTQIAAPLTLREWLAQPAQGPRLMCHPQAGDDLSG
WLRQQPAPQALTLMIGPEGGWSAEEIATAKTAGVVSVRFGPRVLRTETAALALIASISAL
LGWS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcctcgtttctactgtgacccccccctggccgccggccagcgcatttgtctg
ccactggcccttgcacaccacgccatccgggtactgcgtctgcgcgacggggacgatatc
gtgctgtttgacggccaaggcggcgaatatcctgcccgattgcagatcgaaggcaaagcg
ggtcatgctcagttgggcgagcatctgccgcgcgaagccgaactgcctgggcgcatagtc
ctcgcgcaggggctgccctccggcgacaaaatggattggatcgtggaaaaagccgtggaa
ctgggcgccgcggccgtgcagcccatcgctgcgcaacgcagcgtcctgcaactaagcggg
cccaggctggaaaaacgcctgactcactgggagcgggtggcccaagcggccgccgagcaa
tgcggacgcaaccgtctgacgcaaattgccgcaccgctgacgctgcgcgagtggctcgcc
cagccggctcaggggccgcgtctcatgtgccacccgcaggcgggtgacgatctgagcggc
tggctgcgccagcagcctgccccccaggcgctgaccctcatgatcggccccgaaggcgga
tggtcggcagaagagatcgccaccgccaagaccgctggcgtcgtctcggtcaggttcggc
cccagagtcttgcgaaccgagacagccgcccttgcgctcatcgcctcgatcagcgccctg
ctcggctggagttga
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