Bordetella holmesii ATCC 51541: D560_3102
Help
Entry
D560_3102 CDS
T03052
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03030
DNA replication
bho03430
Mismatch repair
bho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D560_3102 (dnaX)
03430 Mismatch repair
D560_3102 (dnaX)
03440 Homologous recombination
D560_3102 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bho03032
]
D560_3102 (dnaX)
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_3102 (dnaX)
Enzymes [BR:
bho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D560_3102 (dnaX)
DNA replication proteins [BR:
bho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D560_3102 (dnaX)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D560_3102 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
DNA_pol3_tau_5
AAA_16
AAA_14
AAA_18
AAA_2
AAA_5
TsaE
AAA_30
nSTAND3
PIF1
RsgA_GTPase
AAA_28
AAA_19
Rad17
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHV91238
LinkDB
All DBs
Position
2886295..2888364
Genome browser
AA seq
689 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGITSKPCGVCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
ESIVGHLQAVLGQEQIGFEVPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGM
LGTIDQRHLVRLLDALATGDARGVLAVADELATRGLSYAGALADFAVLLSRIAIEQRVSG
VTPADDPLGQDIARLAASLHPDAVQLFYSVAVHSRSELSLAPDEYAGFVMACLRMLALNG
EAGPATQREAPRTAPQPALTHDVAAAAPATVAADAAPVETPAVAAVQAAVPAVTASSVTP
ADPIAPDAEPAVAAEPRPSSVALAHSAPSAATPVPPWEDNPAQEAAVVTAVAGQNQPQVA
ASPEAAPDLDQEGPPSWVDESIPDDAEGGYAPAQAYTLDPDDDFETLASEPAPAPAAAAR
AAAAARPARTPRQPRSRLSDMSPQTWPELAARLPVTGLAAELARQSEWAGVQGDAVMLRV
AVRTLAESESRVRLQTVLCEHFGQGLRLEIEVGHTGDGTAHAVARIERAARQQAAEEAVA
VDPFVQALVNDFGGHVVPNSVRAVEPPAA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctggttctggcccgcaagtggcgtccgcgatccttcgataccctggttggc
caggatcacgtcgtgcgcgcattgacgcatgccctggacacccagcgtttgcaccacgcc
tggctttttaccggtacacgtggcgtgggcaagaccacgctgtcgcgtatcctcgccaaa
tccctcaactgcgaaaccggcattacctccaagccgtgtggcgtgtgccgtgcgtgcacg
gagatcgatgctggccgtttcgtcgactacctcgaacttgacgcggcttccaaccgaggc
gtcgaggagatgacgcaactgctcgagcaggcggtgtatgcaccgggagcggggcgtttc
aaggtctacatgatcgacgaagtccacatgctcaccgggcatgcgttcaacgccatgctc
aagaccctcgaagagccgccgccgcacgtcaagttcatcctggccacgacggatccacag
aaaatcccggtcaccgtactgtcgcgctgcctgcaattcaatctcaagcagatgccgccc
gagtccatcgtgggccatttgcaggcggtgctcggtcaagagcagatcggcttcgaggtg
cccgccctgcgcctgatcgggcaagctgcttcgggttccatgcgcgacgccctgtccctg
acggatcaggcgattgcctacagcgcaggcaatctgaccgaagacgcggtgcgcggcatg
ctgggcaccattgatcagcgccatttggtgcgcctgttggatgccctggccacgggggac
gcccgcggcgtgctggccgtggccgatgagcttgctacccgtggtttgtcctatgctggc
gcgctggcggatttcgccgtgctgctctcgcgcatcgcgatcgagcaacgtgtcagcggc
gtcaccccggccgacgaccccctcgggcaggatatcgcgcgcctggcggcaagcctgcat
cccgatgcggtccagcttttctattccgttgccgtgcatagccgcagcgaactcagcctg
gcgccggacgagtacgccgggttcgtcatggcctgtctgcgcatgcttgccctcaatggc
gaggcggggccggcgacgcagcgcgaagcaccacgtaccgcaccccagccagcgttgacc
cacgacgtggctgcggcggcgcctgctacggtggcggcagacgccgcgccggttgagacg
cctgccgttgcagccgtgcaggcggcggtgcctgccgtaaccgcatcgtcggttacccct
gctgaccccatcgcacccgatgccgaacctgccgttgccgccgagccccggccgtcgtcg
gtggcgctggcgcacagcgcgccctctgcggcaacgccggtgccgccctgggaagataac
cccgcacaggaagcggccgtcgtcacggccgtggccggccagaaccaaccccaggttgca
gcatcacccgaggccgcgccagatcttgaccaagaggggccgccgtcctgggtggacgag
tccatcccggatgatgccgaaggcgggtatgcgccagcccaggcctacaccctcgatccg
gatgacgatttcgagaccctggcaagcgaaccggcgccggcgccggctgccgctgcgcga
gccgccgcagcagccaggccggcgcgcacgccgcgccagcctcgctcacgactgagtgac
atgtcgccgcagacctggcccgaactggccgcgcgcttgcctgtcaccgggctggcagcc
gagttggcgcgccagagcgaatgggccggcgtccagggcgacgcggtgatgttgcgcgtt
gccgtgcgcacgctggccgagagcgagagccgggtacggttgcaaacggtattgtgcgaa
catttcggccagggcttgcggctggagatcgaggtcggccacacgggcgatggcacggcg
cacgccgtcgcgcgcatcgagcgcgcggcgcgtcagcaggctgccgaagaggccgtcgcc
gtcgatcccttcgtgcaggcactggttaatgattttggcggacacgtcgtgccgaattcg
gtgcgcgccgtcgagccgccggccgcttga
DBGET
integrated database retrieval system
