Bordetella holmesii ATCC 51541: D560_3165
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Entry
D560_3165 CDS
T03052
Name
(GenBank) exonuclease, RdgC family protein
KO
K03554
recombination associated protein RdgC
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_3165
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D560_3165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AHV91176
LinkDB
All DBs
Position
complement(2939324..2940223)
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AA seq
299 aa
AA seq
DB search
MWFKNLKIYRLSAPWMLTGEQLEESLARHAYQSGNNLEMQSLGWISPRENASLAHSLNGQ
ILLSLRAEKKLLPTTVVNQVARARAQEIEEQQGYKPGRKQMKEIKERVTDELLPRAFSVY
RDTRVWIDTTNHWLVIDAAASAKADEVIGMLVKTVDPLPLENLYVAQSPAAAMTGWLAAD
EAPANFSIDQDTELRASGESRAAIRYVKHSIDADDVRRHIQSGKQCTRLAMTWADRVSFV
LTESMDIKWVAPLDVLKENPENAAFNEDEKFDSDMTLMTGELAKMLAELVEALGGEKRD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaagaatctcaagatctatcggctgtccgccccctggatgctgaccggcgag
cagcttgaagaaagccttgcgcgacacgcctaccagagtggcaacaatctggaaatgcaa
agcctgggctggatctcgccgcgcgagaatgccagcctggcgcacagcctgaatgggcaa
atcctgctgtcgctgcgcgccgaaaaaaagctgttgccgaccacggtcgtcaatcaggtc
gcgcgcgcacgcgcccaggaaatcgaagagcagcaaggctacaagcctggccgcaaacag
atgaaggaaatcaaggagcgcgtcaccgacgaactgctgccgcgcgccttcagcgtctac
cgcgacacgcgagtctggatcgacacgaccaaccattggcttgtgatcgatgcggcggcc
tcggccaaagccgatgaagtcatcggcatgctggtcaagaccgtcgaccctctgcctctg
gaaaacctctatgtggcgcaatcaccagcagcggccatgacgggttggctggccgccgat
gaggctccggccaatttctccatcgatcaggacaccgagctacgcgcctcaggagaaagc
cgtgctgccatccgatacgtgaaacacagcatcgacgccgatgatgtccgtcgccacatt
cagtctggcaagcaatgcacgcgcctggccatgacctgggcagatcgtgtgtcgttcgtg
ctgactgaatccatggacatcaaatgggtcgctcccctggacgtattgaaagaaaacccc
gagaacgcggccttcaacgaggatgagaagttcgattccgacatgacgctcatgaccggc
gaactggcaaaaatgcttgccgaactggtcgaagcgctcggcggcgagaagcgcgactaa
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