Bordetella holmesii ATCC 51541: D560_3286
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Entry
D560_3286 CDS
T03052
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00300
Lysine biosynthesis
bho01100
Metabolic pathways
bho01120
Microbial metabolism in diverse environments
bho01230
Biosynthesis of amino acids
Module
bho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D560_3286 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bho01002
]
D560_3286 (dapE)
Enzymes [BR:
bho01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
D560_3286 (dapE)
Peptidases and inhibitors [BR:
bho01002
]
Metallo peptidases
Family M20
D560_3286 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AHV92324
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Position
complement(3049580..3050713)
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AA seq
377 aa
AA seq
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MSTVLDLVKDLIARPSVTPDDKDCQQLLGDRLARVGFTCETIARGGVTNLWARRGSQAPL
VVFAGHTDVVPPGPREKWDSDPFLPTERDGFLYGRGAADMKSSIAAFLVAVEEFVAANPA
HDGSIAFLLTSDEEGPAIDGTVIVCEALQARGETLDYCIVGEPTSTADVGDVCKNGRRGS
LSGELTIKGIQGHVAYPHLARNPVHQAAPALADLVGIEWDKGNDYFPPTTFQISNMKAGT
GATNVVPGEAVVTFNFRFSTASTPASLKSRVHEVLDRHGLEYDLVWELGGEPFLTARGPL
TDALSSAILAETGLTTELSTTGGTSDGRFIAKICPQVIEFGPCNATIHKINERIALDSLT
PLKNIYRRTLENLLLAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtactggatctggttaaggacctgatcgcccgtccgtcggtcacgcccgac
gacaaggattgtcagcaattgctgggcgatcgcctcgcgcgcgtaggtttcacctgcgaa
accatcgcgcgcggcggcgtcaccaacctgtgggcccgccggggctcgcaggcgccgctg
gtggtgtttgcgggacatacggatgtcgtgcccccgggtccccgcgagaagtgggacagc
gatcctttcttgccgaccgagcgcgacggctttctgtatggccggggtgcggccgacatg
aagagttccatcgctgccttcttggtggcggtggaagaatttgtggccgccaaccccgca
cacgacggctccatagcctttctgctgacctcggatgaggaaggcccggcgatcgatggc
accgtcatcgtctgcgaagccctgcaggcgcggggcgagaccctcgactactgcatcgtg
ggagagccgacgtcgaccgccgatgtcggggatgtctgcaagaacggtcgccgtggctcg
ctgtcgggtgagttgaccatcaagggcatacaggggcacgtggcgtatccgcatctggcg
cgcaatccggtgcatcaggccgcacctgccttggccgatctggtcggtatcgagtgggac
aagggaaatgactatttcccccccaccacgtttcagatttcaaacatgaaggccggtact
ggcgcgaccaatgtcgtgcccggggaggcggtggtgacgttcaacttccgcttctccacc
gcaagcacgccggcttcgctcaagtcacgcgtgcacgaggtgctcgatcgtcacggcctg
gagtatgacctcgtgtgggaattggggggcgagccctttttgaccgctcgcggcccgctg
accgacgccctgtcctcggccattctcgccgagaccggactcactaccgaactgtcgacc
acggggggcacgtcggacgggcgcttcatcgccaagatctgcccgcaagtcatcgaattc
ggcccgtgcaacgccacgatccacaagatcaatgagcgtatcgccctcgacagcctgact
cccttgaagaacatctaccggcgcacgttggaaaacctgctgctggcacattga
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