Bordetella holmesii ATCC 51541: D560_3458
Help
Entry
D560_3458 CDS
T03052
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03030
DNA replication
bho03430
Mismatch repair
bho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D560_3458 (holB)
03430 Mismatch repair
D560_3458 (holB)
03440 Homologous recombination
D560_3458 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bho03032
]
D560_3458 (holB)
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_3458 (holB)
Enzymes [BR:
bho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D560_3458 (holB)
DNA replication proteins [BR:
bho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D560_3458 (holB)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D560_3458 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AHV94434
LinkDB
All DBs
Position
complement(3206118..3207173)
Genome browser
AA seq
351 aa
AA seq
DB search
MSQAQFAPWHLETARAWLGQRERFAHAWLIHGTAGIGKLDFAAAAAASLLCEAPQHGLAC
GACPACAWVASGNHPDLRRVRPDALAVEEGAEAADIADDGGESAPASGSKKAPSKEIRID
QIRALESWFNTATHRGGWRVALIYPAQALNTVAANALLKVLEEPPAHTVFLIVADAPDRL
LPTLVSRCRRLPLATPDGATALAWLQAQGVDPAADWLAAAGGAPLAARRLAAQSDSPVPA
WLRSLVESLAAGRATDVGTLAETLEKLTAAEWLDTLQRFFTDLSLAAHGAALRYFPSLAQ
AVGTVAARAQPAQLAETGRWLTRQRGLAGHPLNAKLFAHAALQRVVLSCQS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggctcaattcgctccttggcatctggagacggcccgcgcctggctaggccag
cgcgagcgcttcgcccatgcctggctcatccacggtacggcaggaataggcaagctggat
ttcgcggccgctgcggcagccagcctcctgtgcgaggcgccgcagcacggcctggcttgc
ggggcctgcccggcctgtgcctgggtggcgtcgggcaatcaccccgatctgcgccgggtg
cgcccggacgcgctggccgtcgaagaaggcgctgaagcggccgatatcgccgatgacggt
ggtgaatcggccccggcttcgggcagcaagaaggcaccctccaaggagatccggatcgat
cagatccgagcgctggagtcgtggttcaacaccgcgacccaccggggcggctggcgcgtg
gcgctcatctacccggcgcaggcgctgaacacggtggcggccaatgccttgctcaaggtg
ctggaggagccaccagcccacacggtgtttttgattgttgccgatgcgcccgaccggttg
ttgcctacgttggtgtcgcgttgccgccgcctgcccctggccacgccggatggtgccacc
gcgttggcctggctgcaggcccagggcgtggatcccgcggcagactggctggctgccgcg
ggcggtgcgcccttggcagcgcgccgtctggccgcgcagtccgacagcccggtgcccgcc
tggttgcgcagtctggtcgaaagcctggcggcgggccgcgcgaccgacgtggggacgctg
gccgagacactggagaagctgactgcggccgagtggctggatactctgcaacgcttcttt
accgatttgagcctggccgcgcatggcgcagccttgcggtatttccccagcctggcccag
gcggtcggcacggtggccgcgcgtgcgcagccggctcaattggctgaaaccggccgctgg
ctcacccggcagcgtgggctggccgggcaccccttgaatgccaaactcttcgcccatgcc
gccctgcagcgtgtggtgctatcctgccagagctag
DBGET
integrated database retrieval system
