Bordetella holmesii ATCC 51541: D560_3545
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Entry
D560_3545 CDS
T03052
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
bho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_3545 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D560_3545 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bho03021
]
D560_3545 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bho02035
]
D560_3545 (fliA)
Transcription machinery [BR:
bho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D560_3545 (fliA)
Bacterial motility proteins [BR:
bho02035
]
Flagellar system
Flagellar assembly proteins
Stator
D560_3545 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AHV92949
LinkDB
All DBs
Position
3281168..3281911
Genome browser
AA seq
247 aa
AA seq
DB search
MPNAEESLLRYSPLVRKLALQLLARLPASVQLDDLMQAGTIGLLDAVRRYQETPDAQFET
YATACIRGAMLDELRSQDWLPRSVRSKSRRIESAIQRQEQRLMRPPTETEIAEELGVPLD
EYQSMLSDAQGIQILHYENIDADGESGAGHWQPACVQSSGNPLNALLASDLRASLIQAIE
RLPEREQLLLSLYYEQGLNLKEIGAVLNVTEARVCQLRSQATARLRATLQELAWAKLPEP
QLLSHVI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgcagaagaaagcctgctccgatactcgccgctcgtgcgcaagctggcattg
caactgcttgcccgcctgccagccagcgtccagctcgatgacttgatgcaggccggcacc
atcggcctgctcgatgccgtacgccgctaccaggaaacgcccgacgcccagttcgagacg
tacgccacggcgtgcatccgtggagccatgctggatgagcttcgcagccaggactggttg
ccacgcagcgtgcgcagcaaaagccggcgcatcgaaagcgctattcagcggcaggagcag
cgcctcatgcgccctcccaccgaaaccgagatcgccgaagaattgggcgtgccgctggac
gaataccaatccatgctctcggacgcgcagggcattcagatcctgcactacgaaaacatc
gatgccgatggagaaagcggcgcaggccactggcagccggcctgcgtgcagagcagcggc
aacccgctcaatgccctgctggcctccgatctgcgcgccagcctcatccaggccatcgag
cgcctgcccgagcgcgaacaactcctgctgtctctctattacgagcaagggctcaatctc
aaggaaatcggcgcagtactcaatgtgaccgaagcccgcgtatgccagttgcgctcgcag
gccactgcgcgcctgcgcgcgacgctgcaggagctggcctgggccaaactgcccgagccg
cagctgctgtcgcacgtcatctag
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