Bordetella holmesii ATCC 51541: D560_3589
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Entry
D560_3589 CDS
T03052
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_3589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_3589
Transporters [BR:
bho02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D560_3589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
AHV92831
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All DBs
Position
3329512..3330795
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AA seq
427 aa
AA seq
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MSTGALFLMGVFTLTVLIDMPIAFGLVLACLAYLTVYDAAPMMVAAQQYVAGLDSFTLLA
IPLFILAAQLMNGAGLTQRIVRLCAAIVGDIKGGLAVVAVLACLMFGALSGSGVADVVAI
GSLLLPAMARSGYDKGFSCALVGSAGATSTIIPPSIVLIIYGTITDTSVGKLFVAGIIPG
LLLGLSLIGVAIWQSRKHNWAGGQPFSWDELRAALVDAIPALMVPVLIIGGIRFGIFTAT
EAASSAIIYALLIGFFWYRPLTVKSLWESLKSTGEGSASILLIIGASGLFAWVLIAEQVP
QALSQLLVDWTDSRVAVLLVLTVVLLALGTFMEAIPVIIIVAPVVMPVLAHYNIDPVHFG
ILLSINMAIGANTPPVGVDLMAACKIGGINMMQTLRPLSWMMLAMTAVMLLLTFVPELVL
FLPRHMQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggtgccctctttctcatgggcgttttcacgttgaccgtgctgatcgacatg
ccgatcgccttcggtctggtgctcgcctgcctggcctatctgaccgtctacgatgccgcg
cccatgatggtcgcggcccaacagtatgtcgcaggtctggacagcttcacgctgctggcc
attccgcttttcatcctggcggcgcaattaatgaacggcgcgggactgacccagcgcatc
gtgcgcttgtgcgctgccattgtcggggacatcaaaggaggcctggccgtggtggcggtg
ctggcctgcctgatgttcggtgcgctgtcgggatcgggcgtggccgacgtggttgccatc
ggcagcctgctgctgccggccatggcccgcagcggctacgacaagggcttcagttgcgcg
ctggtcggcagtgccggcgccacgtccaccatcattccgcccagcatcgtgctcatcatc
tacggcacgattaccgacacctccgtcggcaagctctttgtcgccggcatcatccccggc
ctgttgctgggactatcgctgatcggcgtggccatctggcaatcgcgcaagcacaattgg
gccggcgggcaaccgtttagctgggatgaactgcgcgcggccctggtcgatgccatcccg
gcactgatggtgcccgtgctcatcattggcggtatccggttcggaatcttcaccgccacc
gaagcggcctccagcgccatcatctatgccttgcttatcggttttttctggtaccgccct
ctgacggtgaagtcattgtgggagagcctgaaatccaccggagaaggcagcgcctcgatt
ctgctcatcatcggcgcatcgggcctgttcgcctgggtgctgattgccgagcaagtgccg
caggccctgtctcaactgttggtcgattggacggacagccgggtcgccgtactgctggtg
ctcactgtcgtcctgctggcgcttggcaccttcatggaagccattcccgtcatcatcatt
gttgctccggtcgtcatgccggtgcttgcgcactacaacatcgaccccgtgcatttcggc
atcctgctgtccatcaacatggccatcggtgccaacacgcctccagtaggcgtggacctg
atggccgcctgcaagatcggaggcatcaacatgatgcagaccttgcggccgctgtcgtgg
atgatgctcgccatgacggccgtcatgttgttgctgacgttcgttcccgaactggttcta
ttcttgcctaggcatatgcaatga
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