Bordetella holmesii ATCC 51541: D560_3826
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Entry
D560_3826 CDS
T03052
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bho03000
]
D560_3826
Transcription factors [BR:
bho03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D560_3826
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AHV92331
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Position
3559877..3560779
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AA seq
300 aa
AA seq
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MNVSTRQLRAFVSAADQQNFTRAATEIGLSQPAFSALIKSLEEELDAQLFVRNTRNIELS
PFGKLFESFARRSLNETTTALQHLQDYAAGRIGSVQVAALPSVAASWLPPVFRQFRTQYP
GVTTVLRDGMSQNCVELLAAGDIDFAIATEDRHTAKLERQLLWQDQLHLVCPPDHPLARQ
RKRVTLEQIVQYPIVNFVSHSSVRQHVDAAFSPYPLNTVLEVEHLATASAMVESGVGLTI
VPSLTLYQFRRPSLAIVPIEDSSFKREVFILTHKNKLLALPARAMRDMVIAHVAGLKRGS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctccacgcgccagttgcgcgcctttgtcagcgccgccgaccagcagaacttc
acccgtgccgcaaccgagatcgggctgtcgcagccggctttcagcgccctgatcaagtcg
ctggaggaagaactcgatgcgcagctttttgtgcgcaatacacgcaatatcgagctttcg
ccgtttggcaagctattcgaatcctttgcccgccgctcgctcaacgaaaccacgacagcc
ctccaacacctgcaggactatgccgctggccgcatcggctcggttcaggttgccgccctg
ccctcggtggccgccagttggctgccgccggtatttcgccagttccgtacccaatacccc
ggcgtgaccacagtgctgcgcgatgggatgtcgcagaattgtgtggagcttttggccgcc
ggggacatcgacttcgccatcgccacggaagatcgccataccgccaagctcgaacgccag
ttgctatggcaggaccagctccatctggtctgcccgcccgatcatccgctggcccggcag
cgcaaacgcgtcacgctggagcagatagtgcaatatcccatcgtcaacttcgtcagccac
agcagcgtgcgccagcatgtggacgccgcgttcagcccctacccgctcaacaccgtgctg
gaggtcgagcatctggccacggccagcgccatggtcgaaagcggcgtcggcctgactatc
gttccttcgctgacgctctatcaattccgccggccgtcgctggccatcgtcccgattgaa
gacagcagcttcaagcgcgaggtcttcatcctcactcacaaaaacaaactgcttgcgctg
cccgcgcgcgccatgcgcgatatggtgattgcgcatgtggcgggtttgaaacgcggaagc
tga
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