Bordetella holmesii ATCC 51541: D560_3915
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Entry
D560_3915 CDS
T03052
Name
(GenBank) tonB-dependent siderophore receptor family protein
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_3915
Transporters [BR:
bho02000
]
Other transporters
Pores ion channels [TC:
1
]
D560_3915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AHV94374
LinkDB
All DBs
Position
3642268..3644619
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AA seq
783 aa
AA seq
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MAVALSLALASGLPAANAQATATQTQAARFTIPAGPLAPALRALASSANILLSFTEDQTR
GKTTPGIQGSYTPDAALAALLAGSNLQAVQQDNGGYLLRALPSTTLPAVRVTGIIADDAN
TEGSGSYAATSATIGKIPVALREIPASVSVLTRQRMDDQNVTTIQQGLRYVTGVESIDYG
DGTAYFRARGNQMGIEFDGVSIMNGLQYQQQFDMAMYDRVEVMRGPAGVTDDAIGQPGGT
VNLVRKRPMDEFHLSGETQVGTFGSVRQMFDVTGPLNNEGTLRGRAVMAGNNSLQSTDDT
RNKNGMLYAALDYDVSPQTTLSLSAGYQVTSIKGLDYGAPGVVNASGTALIGGLSGSPSE
NYSPDWNRSHVAIKEVNANLTHRFDNGWNWDTTTFYRSGSLSAKYAYSSPGATQQGLSEF
GDQRQSSETEWFGFDSHVSGPLQAFGRTHTFTAGVNYSQMHSTQKYGFESVYGPYAGGAF
SLYDPNAVPEVSVPFTSGNKDRLQQYSIYTQARLKLADPLTLVLGAREAFLDERSQPILP
TTGDWETVAKVNHRFLPSAGFVWDVTPATTAYASFSRFMSAQTSTTYTGAMLPPRTGEQY
EVGVKNSFFDNRLSTTVALFRINDNNRAVEDPNHPIGSIPGGKARNQGVEFEVAGQPTPN
WNVYAGYTYLNVKFDNDAPDLTDGTDPKHLFKLWTNYRISEGALRDVTVGGGMLTQSSTY
RGVTQGGYAIFNAQVGWRINPHIDVSLQLNNIFDRSYYIRPPSTFFSVYGDGRNAMLTLR
YRM
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttggccgttgcgctgagcctggcgttggccagcggcctgccagcggccaacgctcaggcc
accgccacccagacacaggccgctcgcttcacgataccggcaggcccgctggcgccggcg
ctgcgcgcactggccagttcagccaatattctgctgtccttcaccgaggaccagactcgt
ggcaagaccaccccagggatccagggcagctataccccggacgccgcactggccgcgctt
ctggcgggcagcaacctgcaggccgtgcaacaggacaacggcggctatctgctgcgtgca
ctgcccagcacgacgctgccagccgtccgagtaaccggcatcatcgccgacgacgccaat
acggaaggcagcggttcctatgctgcgaccagcgccaccatcggcaagattccggttgca
ctccgagagatccccgcctccgtgtcggtgctgacgcgccagcgcatggacgaccagaac
gtcaccaccatccagcagggcctgcgttatgtgaccggagtcgaatccatcgattatggc
gatggcacggcctacttccgcgcccgcggcaatcagatgggcatcgagttcgacggcgtg
tccatcatgaatggcctgcagtatcaacagcagttcgacatggccatgtatgaccgggtc
gaagtcatgcgcggaccggcgggcgtgaccgacgacgccatcgggcaaccaggcggtacg
gtcaatctcgtgcgcaagcgccccatggatgagttccacctctccggcgagacacaggtc
ggcacgtttggcagcgtgcgccagatgttcgacgtcacgggtccgctcaacaacgaaggc
acgcttcgtggccgcgcggtcatggcgggtaataattcgctgcagtcgaccgacgacacc
cgcaacaagaacggcatgctctacgcggcgctggactacgatgtctcgccgcaaacgacg
ctttccctttcggcgggctaccaggtcacctccatcaagggtttggattacggagccccc
ggcgtcgtcaacgccagcggcacggcgttgatcggaggcttgtccggctcgccgtcggag
aattacagccctgactggaaccgctcgcatgtcgcgatcaaggaagtcaatgccaatctg
acgcatcgcttcgacaatggctggaactgggacaccacgacattctaccgcagcggcagc
ctgagcgccaaatatgcctactccagtcccggcgcgacgcagcagggcctgagcgaattc
ggagaccaacgccaatcctccgagaccgaatggtttggcttcgatagccatgtgtctggc
ccgctgcaggcgttcggacgcacgcacacgttcactgccggggtcaattactcgcagatg
cactcgacgcagaagtacggcttcgagtcagtgtacggcccctatgccggtggcgccttc
agcctgtatgacccgaatgcggttccggaggtatcggtgccctttaccagcggcaacaag
gacaggctgcagcaatacagcatttacacccaggccaggctgaagttggccgacccgctg
acgctggtgctgggcgcgcgcgaagcctttctcgatgaacgctcccagcccatcctcccg
acaaccggagattgggagacggtagctaaagtcaatcatcgcttcctgccctcggccgga
ttcgtgtgggacgtgacacccgccaccacggcctacgccagtttctcgcgcttcatgagt
gcgcagaccagcaccacctacacaggcgcgatgttaccgccacgcaccggcgaacagtac
gaagtcggtgtgaagaacagcttcttcgacaatcggctcagcacaacggtggcactgttt
cgcatcaatgacaacaaccgcgcggtagaggaccccaatcaccccatcggcagcatcccc
ggtggcaaggcgcgcaatcagggcgtggaattcgaggtggcgggccaacctacccccaac
tggaatgtgtatgccggctacacctacctcaacgtcaagttcgacaacgacgcccctgac
ctgaccgacggcaccgaccccaagcatctgttcaaactgtggaccaactaccgcattagc
gaaggcgcgttgcgcgatgtgacggtcggcggcggcatgctgacccagagctccacctat
cggggcgtcacccaaggcggctatgcgatcttcaatgcgcaggtcggctggcgtatcaac
ccccatatcgatgtatcgctacagttgaacaacatctttgaccgcagctactacatccgt
ccgccgagcacgttcttcagcgtctatggcgatggtcgtaacgccatgctgacgctacgc
tatcgcatgtaa
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