Bordetella holmesii ATCC 51541: D560_3927
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Entry
D560_3927 CDS
T03052
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_3927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bho03021
]
D560_3927
Transcription machinery [BR:
bho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D560_3927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_11
MerR
Sigma70_r3
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AHV92234
LinkDB
All DBs
Position
3655025..3655546
Genome browser
AA seq
173 aa
AA seq
DB search
MQQHKLDASDYASPPNLETLYGDHHPWLQDWLRRRLGNAADAADLAQDAFMRLLAKPLPF
GSRPQARVYLRTLAGGLCVDLWRRRQIEHAWLQTLAAQPEAHVPSAEHQAIVLQTLQEVD
RLVRGLPPKAAHAFIMAVGCEMSDQEIANELGVSTRMVRKYVAQAMLQCLQKL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaacacaaattggacgcttcggattacgcatcgccgcccaacctggaaacgctc
tacggtgaccaccatccatggctgcaggattggttgcgccgccggctgggcaacgctgcg
gatgccgccgatctggcccaggatgcgttcatgcgcctgctggccaaacctctgcccttt
ggcagtcggccgcaggcacgcgtctacctgcgcacgctggctggcgggctgtgcgtcgac
ctctggcgccggcgacagatcgaacacgcctggctgcagaccctggccgcccaacccgaa
gcacacgtgccgagcgccgaacatcaggccatcgtgctgcaaaccttgcaggaggtcgat
cgtctcgtgcgcggccttcctcccaaagcggctcatgccttcatcatggcagtcggctgc
gaaatgagcgatcaggagattgccaacgaattgggtgtctccacccgcatggtccgaaag
tatgtcgcgcaagcgatgctgcaatgcctccaaaaactttga
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