Brachyspira hampsonii: BHAMNSH16_00950
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Entry
BHAMNSH16_00950 CDS
T05655
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03030
DNA replication
bhp03430
Mismatch repair
bhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHAMNSH16_00950
03430 Mismatch repair
BHAMNSH16_00950
03440 Homologous recombination
BHAMNSH16_00950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhp03032
]
BHAMNSH16_00950
03400 DNA repair and recombination proteins [BR:
bhp03400
]
BHAMNSH16_00950
Enzymes [BR:
bhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHAMNSH16_00950
DNA replication proteins [BR:
bhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BHAMNSH16_00950
DNA repair and recombination proteins [BR:
bhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BHAMNSH16_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
ASJ20301
UniProt:
A0AAC9TTT6
LinkDB
All DBs
Position
complement(259917..263627)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSFVHLHVHTQYSILDGAARIKSLYSKKDKTKRLIPGLIDRAKELGMPGIAMTDHGNMFG
AMEFFSEAKDKGIIPIIGCEVYVAPKTRFDKKIENSEEKSAMHLILLAKDKEGYNNLCKL
VTFGYTEGFYYRPRVDHELIEKYNKGLICLSACMGGEIPIAIRKKDYKQASKLAEYYKSI
FGNDFYIELQDHNMPEEKSLNSALYQLAKHHNIELVVTNDVHYVSKEDAKAHEILLAIQT
KATLDSPRRYKFPSNEFHLKTEEEMMKSFAKLPKAFENTVKIAEQCKDLNIMTKTYYMPN
YELANGETETTALRKMCIEGLNKHYNNDIPKEAMERLDMELGVIAKMGFEGYFLVVQDFI
NYARNNDVAVGPGRGSAAGSIVAFASGITKVNPLDYNLLFERFLNPERKSMPDIDVDFQD
DKREVVIDYVTNKYGKDNVSQIATFGALGGRSVIRDVCRVMNIDLATADRLAKSIPDDIK
RVVDIYDHPDCAALVKEIESSRELKNMYEISTRLDGLVRNVGLHAAGVIISSHPIMDLAP
VYQDSKTGTRACQYEMTYVESAGLIKMDFLGIKNLRLIKDAIKDIKERYGVEIDIDKLPL
DDEAVYEIFRKADTGGIFQFESAGMRQMLINIRPTGFDDLVSSVALFRPGPLNSGMDKDY
ADRKNKRKEIVYKHPDLEPILKESQGVLIYQEQIMAISRVIGGFTAAEADDLRKAMGKKI
VEKMNSMEEKFIKGGLERGYDKELLTYLFDTMKGFAEYGFNKSHSVCYALIAYQEAYIKA
HYPMEYYVALLNTVIADTDKIALYLNEIKQKNIEIVTASVFESDALFSQKDGKIVYALHA
VKGVGLHAALAIQEEREKNGQFKNLEDFVKRVDVHLVNRKVYETLIKCGAFSGFGHTESA
LLGSLDAILAHASNYQKETLSGQTMLFDSMSEDDSGSASLVIEKQVEYASNILMENEREV
LGFSLRYHPFARYVSQIDYKYFHNTLDIDNLKDKDEFLLPCVVMSAIETTTKKNTPMITL
KIMDIFTEYVFYITANSQIEKFKDILEEQTGILIKGRRDKNRFSEKIYNNIVDIKLLDSF
LKDKNLKLKEVKRDNIKREESSEMKSENKRVSVSKNDAPFKNTSNKENDIKRSDNVVSNE
AFTSRPNNSIGIKHNNSGKKQLALYMNKNIFDDMDLLCLQNAISSNPGDYTIFLKLKSES
GMEVFKIGENYKVDPNPRFLNEAKSALRSLIEIEYA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttcatttgcatgtacatacacaatattcaatacttgatggggctgctcgt
attaagtcattatattctaagaaggataaaactaaaaggcttataccgggtttaatagac
agagctaaggaattaggtatgccgggaatagctatgactgatcatggaaatatgttcggg
gctatggaatttttctctgaagctaaagataaaggtattattcctattataggctgtgaa
gtatatgttgctcctaaaacaagatttgataaaaagatagagaactccgaagaaaaaagt
gctatgcatttaattcttcttgctaaagataaagaaggatataataatttatgtaaattg
gtaacattcggatatactgaaggtttttattatagaccgagagtggaccatgaattaata
gaaaaatataataaaggcttgatttgtttatcagcatgtatgggaggagaaattcctatt
gctataagaaaaaaagattataagcaggcttcaaaattagctgaatattataaatctatt
tttggaaatgatttttatatagagcttcaggatcataatatgccagaagaaaaatcttta
aatagtgcattataccaattagctaagcatcataatatagaattagttgttacaaatgat
gttcattatgtatcaaaagaagatgctaaagctcatgagatacttttagctatacagact
aaagctaccttagattcgccaagaagatataaatttccaagcaatgaatttcatctaaaa
acagaagaagagatgatgaagtcatttgctaaacttcctaaagcatttgaaaatacagtt
aagatagcagagcaatgcaaagatttaaatataatgactaagacttattatatgcctaat
tatgagcttgccaatggtgagacagaaactacagcattaaggaagatgtgtatagaaggt
cttaataaacattataataatgatataccaaaagaagctatggaaagacttgatatggaa
ttgggtgtcatagctaagatgggttttgaaggatatttccttgtagttcaggattttatt
aactatgcaagaaataatgatgtagctgtaggtccgggcagaggaagtgcggctggttca
atagttgcatttgcttcaggaattactaaagttaatcctcttgattataatttgcttttt
gaaagatttttaaaccctgaaagaaagagcatgccagatatagatgttgactttcaagat
gataagagagaagttgtaatagattatgtaacaaataaatatggcaaggacaatgtatct
caaatagctactttcggagctttgggaggacgatctgttataagagatgtttgccgtgtt
atgaatatagatttagctactgccgacagacttgctaaaagtatacctgatgatattaaa
agggttgtagatatatatgatcatcctgattgtgctgctttggttaaagagatagaaagc
agcagagaattaaaaaatatgtatgaaatatctacaagacttgacggattagttagaaat
gtaggcttacatgcagctggagttattatatcatcgcatcctataatggatttagcaccg
gtttatcaggattctaaaacaggtactagggcttgtcagtatgaaatgacttatgttgaa
agtgctggtcttataaaaatggactttttgggtattaaaaacttaagacttataaaggat
gctataaaagatataaaagaaagatatggtgttgaaatagatatagataaacttccttta
gatgatgaagctgtttatgaaatatttagaaaagctgatacaggcggtattttccaattt
gaaagtgccggtatgcgtcagatgcttataaatatcagacctacaggatttgatgactta
gtatcaagcgtagcattatttcgtcctggacctttaaattccggaatggataaagattat
gctgacagaaaaaataaaagaaaagaaatagtatacaagcatcctgatttagagcctata
cttaaagagagtcagggagtattaatatatcaagagcagattatggctataagccgagtt
ataggcggatttactgctgctgaagctgatgatttaagaaaggctatgggtaaaaagatc
gtagagaaaatgaactctatggaagagaaatttattaagggtggacttgagagaggttat
gataaagagttattaacttatttatttgatactatgaaaggttttgctgaatatggcttc
aataaatcgcactctgtttgctatgctttaattgcatatcaggaagcatatattaaagct
cattatcctatggaatattatgttgcacttcttaatacagttatagctgatactgataaa
atagctttatatcttaatgaaattaaacagaaaaacatagaaatagtgacagcaagcgtt
tttgaaagcgatgctttattttctcaaaaagatggtaaaatagtttatgctttacatgcg
gttaaaggtgtaggtcttcatgctgctttagctattcaagaagaaagagaaaaaaacgga
caattcaaaaacttagaagattttgtaaaaagagttgatgttcatttggttaatagaaaa
gtatatgaaacattaattaaatgcggtgctttttcaggattcggacatactgaaagtgca
ttgcttggttctcttgatgcaatactcgctcatgcttctaattatcagaaagaaacttta
tcaggtcagactatgctttttgattctatgtctgaagatgacagcggaagtgcttcttta
gttatagaaaaacaagtggaatatgcttctaatattttaatggaaaatgaaagagaagtt
ttagggttttcattaagataccatccttttgcaagatatgtttctcaaattgattataaa
tatttccataatactttggatattgataatcttaaagataaagatgagtttttacttcct
tgtgttgttatgtcagctattgaaacaactacaaagaaaaacactcctatgattacatta
aagattatggatatatttactgaatatgtattttatattacagctaatagtcagatagaa
aaattcaaagatatactagaagaacagacaggaatattaataaaaggacgaagagataaa
aatagattctcagaaaaaatatataataatatagttgatataaaattattagattctttc
ttaaaagataaaaatcttaaacttaaagaagtaaaaagagataatataaagagagaagaa
tcttctgaaatgaaatctgaaaataaaagggtttctgtaagtaaaaatgatgctccattt
aaaaatacttctaataaagaaaatgatattaaaagatctgataatgttgtttctaatgaa
gcgtttacaagcagacctaataatagtataggaataaaacataataacagcggtaagaag
caattagcattatatatgaataaaaatatatttgatgatatggatttattatgtttgcaa
aatgctatatcttcaaatccgggagactatactatattcttaaaattgaaatctgaaagc
ggtatggaagtatttaaaataggtgagaattacaaagttgatcctaatcctagattttta
aatgaagcaaaaagtgcattgagatcattaatagaaattgaatatgcttaa
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