Brachyspira hampsonii: BHAMNSH16_03445
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Entry
BHAMNSH16_03445 CDS
T05655
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHAMNSH16_03445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhp03019
]
BHAMNSH16_03445
Messenger RNA biogenesis [BR:
bhp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BHAMNSH16_03445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_NusA_C
DUF7669
Motif
Other DBs
NCBI-ProteinID:
ASJ22756
UniProt:
A0AAC9TVF6
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Position
complement(849902..851419)
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AA seq
505 aa
AA seq
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MIITSVVVAFVFGYITRFVIAKIKLNSTEIITHKLLQSAREQAENERKTILSEANSEIQK
ERNRLESENRDRKAEIQKLENRVLQREANIDKKSQYLENKEHNIENKMKKIKEQEDKLSF
VIQEAERELERISGLTKEEAKADLIKNIEEDAKKSATKIVDNIEKNAIETGEKKAREIIV
QTIQRLSSEVAQESSVTSVSLPSEEMKGRIIGREGRNIRMLETLTGVDIIIDDTPEAVVI
SCFDPVRKHIAKVSLEKLILDGRIHPARIEEVVERTKREVEDSIMEAGENAIVDLNLTTM
HHELIRHMGRLQYRTSYGQNMLAHSKEVANIAAMIAAEIGANVDLAKRSAFLHDIGKAIE
TEGEGSHAMSGADLAKRCGEKEEVVNAIRAHHNDVDTQTVEAVIVKAADAISAARPGARR
ESFESYIKRLDNLEKIADSIEGVEKSFAIQAGRELRVMAKSDMVDDVHAKQIARDIAKRI
EDELKYPGIIRVTVIRETRAVEVAR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ataataatcacctctgttgtagttgcgtttgttttcgggtatataacccgttttgttata
gctaaaataaagcttaattctacggagataataacacataaattgctccaaagtgcaaga
gagcaagcagaaaatgagagaaagactatactttctgaagctaattctgaaatacagaaa
gaacgtaataggttagaaagcgaaaatagagacagaaaagctgaaattcagaaattagaa
aatagagtgctacaacgagaggctaacattgataaaaagtcccaatatttggaaaataaa
gaacataatattgagaataaaatgaaaaaaataaaagaacaggaggataaattaagtttc
gtaatacaagaagcagaaagagaacttgagagaatatcagggcttactaaagaagaagct
aaggctgatttgattaaaaatatagaggaagatgctaaaaaatctgctactaaaatagtt
gataatatagaaaaaaatgccatagaaacaggagaaaaaaaggctagagaaattatagtg
caaactatacaaaggctttccagtgaagtggctcaggaaagttctgtaacatcagtgtct
ttacctagtgaggaaatgaaaggcagaatcataggaagagaaggaagaaatatcagaatg
cttgagacgcttacaggtgttgatattatcatagatgatactccggaagctgttgtaata
tcatgctttgatcctgtaagaaaacatatagctaaagtttcattagaaaaacttatattg
gatggaagaatacaccctgccagaatagaagaagttgttgagaggactaagagagaggtt
gaggattctataatggaagctggtgaaaatgctattgtagatttgaatcttactactatg
catcatgaattaatcagacatatgggccgtcttcaatatagaactagttatggacaaaat
atgcttgcccatagtaaagaggttgctaatattgccgctatgatagctgctgaaataggg
gctaatgttgatttagctaagagaagtgcatttttgcatgatataggaaaggctatagaa
acagaaggcgaaggttctcatgctatgagcggtgctgatttggctaaaagatgcggagaa
aaagaagaggttgtaaacgctataagagcccatcataatgatgttgatactcagacagtt
gaagctgtaatagtaaaggctgctgatgctattagtgcggcaagacctggtgcaagacga
gaatcttttgaaagctatattaagcgtttggataatttagagaagattgctgatagtata
gagggggttgaaaaatcttttgctatacaggcaggacgcgagcttagagttatggctaaa
agtgatatggtagatgatgttcatgctaaacagatagcaagagatattgctaaaagaata
gaagatgaattaaaatacccgggtataattagagttactgttattagagaaactagagca
gttgaagttgcaaggtaa
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