Brachyspira hampsonii: BHAMNSH16_05350
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Entry
BHAMNSH16_05350 CDS
T05655
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHAMNSH16_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhp03021
]
BHAMNSH16_05350
03019 Messenger RNA biogenesis [BR:
bhp03019
]
BHAMNSH16_05350
Transcription machinery [BR:
bhp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BHAMNSH16_05350
Messenger RNA biogenesis [BR:
bhp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHAMNSH16_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
ASJ21102
UniProt:
A0AAC9XJS4
LinkDB
All DBs
Position
complement(1275510..1277012)
Genome browser
AA seq
500 aa
AA seq
DB search
MPFPTKKRVKLSNENEEMEASAAQPKKVVRKKVVKQVVSEANEENTNNIETVQEKYELAK
DLEDNNNEVKELKRPHDILYISKLSVLTFEELLEFAETYGIKKDTGNNIRRQELMHAILK
AQIALEGKIVAEGTLETLQDGFGFLRSKNSNYLVGPDDIYISPAQIRLFGLRTGDLITGE
VRPPKDNAGEKFFALLRIESVNGEEPNNLYKRPHFDKLTPIFPNERINLEFAPNKISTRI
INLVSPIGKGQRGLIVAPPKAGKTMMLQEIANAICKNYPDIKLFILLIDERPEEVTDMRR
QVPEAEVIASTFDETPDKHCQVSEMVLEKAKRLVENKHDVVIILDSITRLSRAYNLVVPA
SGKVLTGGVDSNALHKPKRFFGAARNIEEGGSLTIIASALVDTGSKMDDYIYEEFKGTGN
MELHLDRKLANRRLFPAIDIDSSSTRREDLLLTEEEKNKMWALRKYMQSQGIDEDQLIET
VIDKMNSTKDNAEFLKLLNS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccaactaaaaaacgtgtaaaactatctaatgaaaacgaagaaatggaagca
tctgcagctcagccgaaaaaagttgttaggaaaaaagttgtaaagcaagttgtttctgaa
gctaatgaagaaaatacgaataatatagaaactgtacaggaaaaatatgaattggctaag
gatttagaggataataataacgaggtaaaagaattaaaaagacctcatgatatactttat
attagcaaattgagtgttctaacttttgaagagttattggaatttgctgaaacttatggc
ataaaaaaggataccggaaacaatatcagaagacaggagcttatgcatgctatattaaag
gctcagattgctttagaaggaaaaatagttgctgaaggtactttagaaactttgcaagat
ggttttggtttcttgcgttcaaaaaatagtaattatttagtaggacctgatgatatatat
atttctcctgctcagataagacttttcggacttagaacaggtgatttaattacaggtgag
gttagacctcctaaagataatgctggtgagaaattttttgctttacttagaatagaatct
gttaatggagaagaacctaataatttatacaaaagacctcattttgataaattaactcca
atttttcctaatgagcgtataaatctagagtttgcacctaataaaatttctactcgtatt
attaatcttgtttctcctataggtaaaggtcaaagaggattaatagtagcaccgcctaaa
gcaggtaaaactatgatgcttcaggaaattgctaatgctatatgcaaaaattatcctgat
attaaacttttcattcttcttatagatgagcgtcctgaagaagttactgatatgagaaga
caagtacctgaagctgaagttatagcatctacttttgatgaaacccctgataaacattgt
caagtttctgaaatggtgcttgaaaaagctaaaagattggtagaaaataaacatgatgtt
gttataatacttgattctattacaagactttcaagggcttataacttggtagttcctgca
agcggtaaggttttaacaggaggagtagattctaatgctcttcataagccaaaaagattc
tttggtgctgcccgtaatatagaagaaggcggttctcttactataattgcttctgcctta
gtagatactggaagtaagatggatgattatatatatgaagagttcaaaggtactggtaat
atggagcttcatttagacagaaaacttgctaatagaagacttttccctgctattgatatt
gattcttcttctactaggagagaggatttacttcttactgaagaggaaaaaaataaaatg
tgggcattgaggaaatatatgcagtctcagggtatagatgaagatcagttaatagagact
gttattgataaaatgaattccactaaagataatgctgagttcttaaaattattaaattcg
taa
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