Brachyspira hampsonii: BHAMNSH16_06230
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Entry
BHAMNSH16_06230 CDS
T05655
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03410
Base excision repair
bhp03430
Mismatch repair
bhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHAMNSH16_06230
03430 Mismatch repair
BHAMNSH16_06230
03440 Homologous recombination
BHAMNSH16_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhp03400
]
BHAMNSH16_06230
DNA repair and recombination proteins [BR:
bhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BHAMNSH16_06230
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BHAMNSH16_06230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BHAMNSH16_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DNA_ligase_aden
Toprim
Motif
Other DBs
NCBI-ProteinID:
ASJ21266
UniProt:
A0AAC9XKC5
LinkDB
All DBs
Position
complement(1458291..1460450)
Genome browser
AA seq
719 aa
AA seq
DB search
MDINNLNTSILELLKLRGITSKEDIYDFFFQDIYSLSNPFNIRDINVFVDRVKEAIENDE
KILIYGDKDADGITAASIIYNTLKMVTKNVEAFVPNHTTGYGLSKAVIEEYANSGISLII
TVDCGISNAEEVEFARDLSIDIIVTDHHDIPEILPNAYAVFNPKISNTGFVSKNFSGCAV
AFKLMQAFVFSYTKLYNKDIIVLDYEIDRSKNVLKRIRALKSTNFVISDEVFGFELINSD
NRYKSIYADYYDELMSEDEVLEELASYMFEGDGCVLVLTGGEDRLKRLIHLYGKYEIYLP
EYDNVYDLLQLGAKYGNVNIKTTKTLDDFALALNVNIYRYDNIEYRDLIIKMEIFRRLFY
ISQKQLHSYIKKKSILVLFGSVADVVPLIEENRAYVKCALKELEKPSHIRYNIILERINL
LNTKIDTQAISWRLAPFINAAGRMGSPETALKLLTCEIKEEALTLSNEVYNMNETRKSLT
ESNFTIVNEYIKANSCLDLPIIVVKSKKIEQGLTGLIAGKVLSEYGKTAVIMHESDEGIC
IGSIRSRGEDNARDMLEYANIYLTKFGGHKNAAGFTLNTDNFEKFQSKIIKYASNQNFQT
EKNDDVFDMELSFKEIDIKFARLLELFEPYGCGNEEPLFMSKKVKVNSINKMKKNNKIHL
RLELLQDNKKVNAIMWDKSDEEADKLLSSDYIDIIYKLKVNRFGGSEDARIYIESYKIF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatataaataacttaaatacatcaatattagaacttttaaaattaaggggtataact
tcaaaagaagatatttatgatttcttttttcaggatatatattcactgtctaatcctttt
aatataagggatattaatgtatttgtagacagagtaaaagaagctatagaaaatgatgag
aagatattaatatatggtgataaagatgcagacggtataacagctgcatctattatatac
aatacattaaaaatggttacaaagaatgttgaggcatttgtacctaatcatacaacagga
tacggactttctaaggcagttatagaggaatatgccaattcaggtataagccttattata
acagttgactgcggtatatctaatgctgaagaagtggagtttgcaagggatttatcaata
gatattatagtaacagatcatcatgatataccggagatacttccgaatgcttatgcggta
tttaatcctaaaatttcaaatacaggttttgtgtcgaagaatttttcaggctgtgcggtt
gcttttaaacttatgcaggctttcgtgttttcttataccaagttatataataaggatata
atagtattggattatgagattgataggtctaaaaatgtattaaaaagaataagggctttg
aaatctactaactttgttataagcgatgaggtatttgggtttgagcttattaatagtgat
aatcgctataagtcaatatatgctgattattatgatgagcttatgagcgaagatgaggtt
ttagaagagcttgctagttatatgtttgaaggcgacggctgcgtattggtgcttacaggc
ggagaagaccgattaaaaaggcttattcatctttatgggaaatatgaaatatatttgcct
gaatatgacaatgtatatgatctgcttcaattaggtgctaaatacggtaatgttaatata
aaaacaacaaagactttagatgattttgctttggctcttaatgttaatatttacagatat
gataatatagagtatagagatttaattataaaaatggaaatattcagaaggctattttat
ataagtcagaaacagcttcacagttatataaagaagaagtctatacttgtattattcggc
agtgttgctgatgttgtgccgcttatagaagaaaatagggcttatgtgaaatgtgcttta
aaagaattagaaaagcctagccatattagatataatattatacttgagagaattaattta
ttaaatacaaagatagatactcaggctataagctggaggcttgctccttttataaatgcg
gctggaagaatgggaagccctgaaacagcgttaaaactccttacatgcgagataaaagag
gaggctttgactttatcaaatgaagtttacaatatgaatgagactagaaaatctttgact
gaatctaattttactattgtaaatgaatatataaaggctaatagctgtttagatttgcct
attatagtggtaaaaagtaaaaagatagagcaggggcttacaggacttattgctggaaag
gtattgagcgaatacggaaaaactgcagtgattatgcatgagagcgatgagggtatttgt
ataggaagcataaggagtaggggagaggataatgcaagagatatgcttgagtatgccaat
atttatttaactaaattcggaggtcataagaatgctgccggatttactttgaatacggat
aattttgagaagtttcagagtaagataataaagtatgcatcaaatcagaatttccaaact
gaaaaaaatgatgatgtatttgatatggagcttagttttaaagagatagatataaaattt
gcaagattgttggaattgtttgagccttacggatgcggaaatgaagagcctttatttatg
tctaaaaaagttaaagttaatagcatcaataaaatgaaaaaaaataataaaatacattta
aggcttgaattattacaggataataaaaaagttaatgctattatgtgggataaaagcgat
gaggaggctgacaaattattatcatctgattatatagatattatttataaattgaaagtt
aatcgtttcgggggaagcgaagatgctagaatatatatagaaagctataaaatattttaa
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