Brachyspira hampsonii: BHAMNSH16_13935
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Entry
BHAMNSH16_13935 CDS
T05655
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHAMNSH16_13935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhp03400
]
BHAMNSH16_13935
DNA repair and recombination proteins [BR:
bhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHAMNSH16_13935
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHAMNSH16_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
DUF244
Motif
Other DBs
NCBI-ProteinID:
ASJ22686
UniProt:
A0AAC9TXP6
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All DBs
Position
3128075..3130126
Genome browser
AA seq
683 aa
AA seq
DB search
MNFKLESNFKPSGDQITAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTLV
MSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDRL
RLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQYE
RVKDVLERARFKVIGDTIEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKLAEQDRVVI
YPAKHFVTGGDKLAAGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGYC
AGIENYSRPLSGRKEGDRPACLIDYFPEDFLTIIDESHVSVPQIRGMFFGDRSRKETLVK
YGFRLPSALDNRPLFFEEFEKLTNDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPIIE
VYPIDGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTVE
RVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAAR
NANGRVIMFADTISDAMKVAIDETERRRKIQMEYNKEHNITPKTIIKKIQDIIEREEKVE
TSYELHFDFRRFNERVKIDPQQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQL
KPQKKNVHKNITSKNPNGKRKNN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaattagaatcaaatttcaagccttcaggagatcaaataacagcaatagac
tcactagttaaaggacttgaaaataaaaataaatatcaaactctgcttggagttacagct
agtggaaaaacttttacaatagcaaatgtaatagaaaaagctaatagaccgacattagta
atgtcgcataataaaactttggcagctcagctttatagggagcttaaagatttttttcct
aataatgctgttgagtattttgtttcatactatgattattatcagcctgaagcttatgta
ccggctaaagatttgtatattgataaagatgcatctgttaatgatgaaattgacagatta
agacttaaagcaactacatcgcttcttgaaaggagagatgttataattgttgcttctgtt
tcatgtatatacggattgggttctcctgaagattatagaaaactttatatagcaatagaa
aaagacggagaatatgacagagatgagataatagaaaaattagtatctattcaatatgaa
agagttaaagatgtgcttgagagagcaagatttaaggttataggcgatactatagaaata
atgagtgcttattctgatgaggttatcagagtagagtttttcggtgatactgttgagcgt
ataataaaaattaatcctataacaagacaaaaattagcagaacaagacagagttgtaata
tatcctgcaaagcactttgttacaggaggagacaagttggctgcaggtataaaattaata
gaagaagaacttgaagagcagtataataaatttaaatccgaaggaaaattggtagaggca
gaaagaatatacggaagaacaaaatatgatttggaaatgcttagagaggtcggatactgt
gcaggaatagaaaattattcccgtcctttatccggaagaaaagaaggagacagacctgct
tgtttaatagactattttcctgaagactttttaactattatagatgagtcgcatgtaagt
gttcctcagattagaggaatgtttttcggagacagaagcagaaaagagactttagtaaag
tatggtttcagacttccttcagctcttgataacagacctttattttttgaagagtttgaa
aaacttactaatgatacaatatatattagtgccactccggcagaatatgaattaaagaaa
agcagtcaggttgtagagcagataattcgtcctacaggattgcttgatcctataatagaa
gtatatcctattgacggacagatagacagaatactagaagagataaaaaagactgtatca
aacaatgagagaatatttataacaacactcacaaaaaaaatggctgaagaccttacaaaa
tatttaaatgaaaacggagtaagaactcgttatcttcattctgatattcagacagttgaa
cgcgttgaaattataagggatttgaggcttggggcatttgatgtacttgtaggcattaac
cttttgagagaggggcttgatgtaccagaagtttctttaatattaatacttgatgctgac
aagacaggttttttaagaaatacaactaccttaatacagactataggacgcgccgcaaga
aatgcaaatggcagagttataatgttcgctgatactataagcgatgctatgaaagttgca
atagatgaaacagagagaagaagaaaaatacagatggagtacaacaaagagcataatatt
actcctaaaacaatcatcaaaaaaatacaggatataatagaaagagaagagaaagttgaa
acatcttatgagcttcatttcgatttcagacgatttaatgaaagagtaaaaattgaccct
caacagaaaagtgatgattatataaaagagcttgaaaaagagatgaaaaaagcatcagac
agcttagaatttgaaaaagctattgagataagagaaaaaattaatcaattaaaacaatta
aagcctcaaaagaaaaatgtacataaaaatataacttctaaaaatccgaatggaaaaaga
aaaaataattaa
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