Brachybacterium huguangmaarense: BRM3_01235
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Entry
BRM3_01235 CDS
T08617
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRM3_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_01235
Enzymes [BR:
bhq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BRM3_01235
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BRM3_01235
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRM3_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UYG17088
LinkDB
All DBs
Position
253368..254213
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AA seq
281 aa
AA seq
DB search
MPELPEVDALVGFLRTRAVGERVERADLAELSLLKTYDPPLTALVGRTVDDVSRVGKALI
LTLGDLELVCRLARAGWLAWHDRVPATAVRMGRGPLGLRVSFTSGAGFDLREAGTTKNAS
VALVHDRHEVPAVAQAGPDAGSIDAETFAAALGGTRARIKNALVDQRLLAGIGNAYSDEI
LHVARLSPFAPAHGVDPDHVLEAMRGVLGTAREALEGLPPAQIKAAKKRGLRVHGRAGEP
CPVCGTTIAEVSYADTSLQYCPTCQTGGRRLSDRRMDRLLR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgacgctctcgtgggcttcctgcgcacgcgggccgtcggc
gagcgcgtcgagcgcgccgacctcgccgagctgagcctcctgaagacctatgacccgccg
ctgaccgccctggtcggccgcacggtcgacgacgtctcccgagtgggcaaggcgctcatc
ctgaccctgggcgacctcgagctggtgtgccgcctcgcgcgcgccggctggctcgcctgg
cacgaccgcgtgccggccacggcggtgcgcatgggccggggcccgctcgggctgcgcgtg
tccttcacctcgggcgcgggcttcgacctgcgcgaggcggggaccaccaagaacgcctcc
gtcgccctcgtgcacgaccgtcacgaggtgccggccgtcgcgcaggccgggccggacgcc
ggctcgatcgacgccgagaccttcgcggccgcgctcggcggcacgcgggcgcgcatcaag
aacgcgctcgtggatcagaggctgctcgcgggcatcggcaacgcgtactccgacgagatc
ctgcacgtcgcccgcctgtcccccttcgcccccgcgcacggggtcgacccggaccacgtg
ctcgaggcgatgcgcggcgtgctgggcacggcgcgcgaggcgctcgagggcctgccgccc
gcgcagatcaaggccgccaagaagcgcggtctgcgggtgcacggccgcgcgggcgagccg
tgcccggtgtgcgggaccacgatcgcggaggtctcgtacgccgacacctcgctgcagtac
tgccccacgtgccagacgggcggccggcggctgagcgaccgtcggatggaccggctgctc
cggtag
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