Brachybacterium huguangmaarense: BRM3_01710
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Entry
BRM3_01710 CDS
T08617
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRM3_01710
09124 Replication and repair
03420 Nucleotide excision repair
BRM3_01710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhq03021
]
BRM3_01710
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_01710
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRM3_01710
Transcription machinery [BR:
bhq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BRM3_01710
DNA repair and recombination proteins [BR:
bhq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BRM3_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UYG17178
LinkDB
All DBs
Position
356893..358536
Genome browser
AA seq
547 aa
AA seq
DB search
MTDGPLIVQSDKSLLLEVGHPNAPAARAAIAPFAELERAPEHIHTYRITSLGLWNARAAG
YDAESVIAALVENSRYPVPHALLIDVADTMDRYGRLQLQSDPAHGLVLHALDRAVLEEIV
RAKRVAGMLGERIDEVTVAVHPSERGNLKQALVKLGWPAEDLAGYVDGEHHRIELVEDTW
SLRPYQRQAVEGFHLGGSGVVVLPCGAGKTLVGAGAMAQTSRTTLILVTNTVSARQWKDE
LIRRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGVHPHLELMSARDWGLIVYDEV
HLLPAPVFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKDIEAQGYIAP
AVCTEVRVSLPESDRMVHATAEAEDRHRLAATHPAKTAVVEQLAATHAGEPMLVIGQYLD
QLEEISERLGCDLITGQTSVKKRQELFGAFRRGEIDRLVVSKVANFSIDLPEASVAVQVS
GAFGSRQEEAQRLGRLLRPKADGREAHFYTVVTRDTQDQDFAAHRQRFLAEQGYGYSIVD
AEDLAGV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggccccctcatcgtccagagcgacaagtccctcctcctcgaggtggggcat
ccgaacgcgcccgcggcccgtgccgcgatcgcccccttcgcggagctcgagcgcgcgccc
gagcacatccacacctaccgcatcacgagcctcggtctctggaacgcgcgcgccgccggc
tacgacgccgagtccgtgatcgcggcactcgtggagaactcgcgctaccccgtgccgcac
gcgctgctcatcgacgtcgccgacacgatggaccgctacgggcgcctgcagctgcagtcc
gatcccgcgcacggcctcgtcctgcacgccctcgaccgcgccgtgctcgaggagatcgtg
cgcgccaagcgcgtcgccggcatgctcggcgagcgcatcgacgaggtgaccgtggccgtg
cacccgtccgagcgcggcaacctcaagcaggcgctcgtgaagctcggctggcccgccgag
gacctcgccggctatgtcgacggcgagcaccatcgcatcgagctggtcgaggacacgtgg
tcgctgcgcccctaccagcgccaggccgtcgagggcttccacctcggcggcagcggggtg
gtcgtgctcccgtgcggcgccggcaagaccctcgtcggcgcgggcgcgatggcgcagacc
tcgcggaccacgctgatcctcgtgaccaacacggtctcggcgcgacagtggaaggacgag
ctgatccgccgcacctcgctcacggaggacgagatcggcgagtactccggcaccaagaag
gagatccggccggtcacgatcgcgacctaccaggtgctcacgaccaagcgcaagggcgtg
cacccgcatctcgagctcatgagcgcgcgtgactggggcctcatcgtgtacgacgaggtg
cacctgctgcccgcgcccgtgttccgcatgaccgcggacctgcaggcgcggcgccggctg
ggcctgaccgcgaccctcgtgcgtgaggacggccgcgagggcgaggtgttctccctcatc
ggccccaagcggtacgacgccccgtggaaggacatcgaggcccaggggtacatcgccccg
gcggtgtgcacggaggtgcgggtctccctgcccgagtcggaccgcatggtgcacgcgacc
gcggaggccgaggaccgccaccgcctcgctgcgacccacccggccaagaccgccgtcgtc
gagcagctcgccgcgacccatgcgggcgagccgatgctcgtgatcggccagtacctcgac
cagctcgaggagatctccgagcgcctgggctgcgacctcatcacgggccagaccagcgtg
aagaagcgccaggagctgttcggggcgttccggcgcggcgagatcgaccgtctggtcgtc
tccaaggtcgcgaacttctcgatcgacctgccggaggcctcggtcgcggtgcaggtctcg
ggtgccttcggctcccgccaggaggaggcccagaggctcgggcggctgctgcggcccaag
gccgacggccgtgaggcgcacttctacaccgtcgtcacgcgcgacacccaggaccaggac
ttcgcggcgcaccggcagcggttcctcgccgagcaggggtacgggtactcgatcgtcgac
gccgaggacctcgcaggggtgtga
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