Brachybacterium huguangmaarense: BRM3_03060
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Entry
BRM3_03060 CDS
T08617
Name
(GenBank) PKD domain-containing protein
Organism
bhq
Brachybacterium huguangmaarense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
Bact_surface_Ig-like
InlK_D3
Rax2
Y_Y_Y
DUF5122
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-ProteinID:
UYG18186
LinkDB
All DBs
Position
691603..696558
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AA seq
1651 aa
AA seq
DB search
MHPASRVHQGFIRRGLAALTATVLVAVGALITVPAARADDTPTPSSPAPLLQRTPDHVTS
DDLPTVQINDGYVWAQTTIGTTVYAVGKFANVRPAGAAVNTNLTPRSNVLAYDITTGNLI
TAFAPTVNGVVKSVTASPDGKRIYIGGSFDTVNGQPRWNFAALDATTGQLVPGFNSSIGG
TGVYAMTATSSGVYVGGLFTQANGTTRQNLAAFDPSTGALLAWAPITDRQVDAMVMEPQT
GKVVIGGRFYSTNGQVQRGLANLDPVTGAINTAWQAPNVVQNGWNTGSDAGSAGIFGLAA
DASGVYGTGWVYANAAVGNLEGVFAADAGSGDIRWISDCHGDHYGVYSTGSVVYATDHTH
QCETVSLWPDSNPRAYRYAESYTTYANGTLTRSSSAGSTYKDWSGTPSPSAYDWFPDFTV
GTTSGLGQAGLSVTGAAGYISIGGEFGTVNNLSQQGLTRFSTAPPGGAKQGPRVQTSSWT
PQAISVTSGTARISIPANWDRDDLNLTYTLRRQGSSTPVATQTVASTWWNQPTVTLNDSG
LTPGSSQTYTVTATDADGNSRASSPVTVTIASSSTSPYASTVLQDNPSLYYRLGGTAVDW
AGANNPVYGANVTTVTPGGIADQGSAASRFDGTNKGIVSSSKTASTASSLSEETWFKTTT
TEGGMLIGYGDSQTGSSSNHDRHVYMTNAGKIVFGVYPGSAQTITSPQSYNDGNWHHVVS
TLGSDGMKLYLDGTLVASNASVTTAQPFTGYWRIAGDNVGGWPNAPTSNYFSGSMNDVAI
YSSALTPQQVAQHYSIGKGLTPPTAAFTTTSADLKASFDASGSTAMNGHSITSYAWNFGD
SSAAGTGKTATHTYASAGTYPVTLTVTDDSGMTSSVTNSVTVLAPNDPPTASFTSTASGL
TASVDGTASSDPDGSLVGYSWDWGDGTAAGTGMTMAHTYNEPGTYTITLTVTDNRGGTAT
KTRDVTVTHAAPTASFTAVADGLGVSADGSGSTASDGATLTYAWDWGDDSTDGSGRTATH
TYAAAGTYSIKLTVTDSMGSTATKTQQVTVTAVTYAASDDFSRTVPSGWGAADIGGTWSA
LYGPAADGSVDGSRGNITLSGGKTRNMALAGLSVRDSEASVQFSLSSPPSQGSSYVGIAS
RQSASSNYTARVWMNGDGSVWLLAQQSGTDLKVMKMPGLTWTNGEVFHLKTKVSGTSPTT
IQAKVWKDGSPEPTDWQLTTTDSTAALQAAGYTSVQFARAASATTSSTASFDTFRVVDLS
PPPAATAPTASFTAQTTDLKTTVDASASTAQDGATISTYTWDWGDNSTAGTGKTTNHTYT
QAGTYTVKLTVKDSNGLTGTTTKTITATDPPAATAPTASFTAQTTDLKTTVDASASTAQD
GATISTYTWDWGDNSTAGTGKTTNHTYTQAGTYTVKLTVKDSNGLTGTTTKTITATDGPP
DLSSYLAADGFGRTVATGWGASDKGGAWSTLYGGASAASVASGSGKLEIPTGKVRFQALN
GVSVQDVLLEANVSAADAPATGQSYVGFFARQNASGDNYQVRVWLRSDGSVWLVTQHGND
VLNTYAVPGVTWASGDSFTVKAQVSGSGTTTITAKLWKAGSTEPSAWQITSTDTTAALQT
PGTIGVSASRSSSATTTGTYNFSRFRATSLA
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccgcatctcgcgtccatcaaggattcatccgtcgtggtctcgcggcactcacg
gcaaccgtgctcgtggccgtcggtgctctcatcaccgttcccgcggctcgtgccgatgac
actccgacgccctcctcgccggcgcccctgctgcagcgaacccctgaccatgtcacctcc
gacgacctgcccaccgtgcagatcaacgacggctatgtgtgggcccagacgaccatcggc
acgacggtgtacgcggtcggcaagttcgccaacgtccggccggccggcgcagccgtcaac
accaatctgacgccgcgcagcaacgtcctcgcgtacgacatcacgaccggaaacctcatc
accgccttcgcgcccaccgtcaacggcgtggtcaagtccgtgaccgcctcgcccgatggc
aagcggatctacatcgggggctcgttcgacaccgtcaacggccagccccgctggaacttc
gcggcgctggacgccacgaccgggcagctcgtgcccggcttcaactcgtccatcgggggc
accggcgtctacgcgatgacggcgacgtcctcgggcgtctacgtgggcgggctcttcacc
caggccaacgggacgacacgtcagaacctggccgccttcgacccgagcaccggtgccctt
ctcgcctgggcgccgatcacggaccggcaggtcgacgcgatggtgatggagccgcagacc
ggcaaggtggtcatcggtggccggttctactccaccaacggccaggttcagcgcggcctg
gccaacctcgaccccgtgacgggtgcgatcaacaccgcatggcaggctccgaacgtcgtc
cagaacggctggaacaccggatcggatgccggttcggctggcatcttcggcctcgccgcc
gacgcgagcggtgtctacggcaccggctgggtatatgcgaacgctgcagtgggcaacctc
gaaggcgtcttcgccgccgacgcgggaagtggagacatccgatggatctccgactgccac
ggcgatcactacggcgtgtactcgaccgggtcggtcgtgtacgcgaccgatcacacgcac
cagtgcgagaccgtcagcctctggccagactcgaatccccgcgcctatcgctacgccgag
tcgtacacgacctacgcgaacggcacactgacacgttcctcgagcgccggaagcacgtac
aaggactggagcggcaccccctcgccgtcggcatacgactggttccccgacttcacggtc
ggcacgacgtcgggcctcggtcaggccggactgagcgtgaccggcgccgcgggctacatc
tcgatcggcggcgagttcggcacggtgaacaatctgtcccagcagggcctgacacgattc
tccaccgctcctccgggaggcgcgaagcaagggcctcgagtacagacgtcgagctggaca
ccgcaggcgatctcggtgacctcggggacggcgcgcatcagcatcccggcgaactgggac
cgcgacgatctcaatctcacctacacgctgcgccgacagggctcatccacaccggtcgcg
acccagacggtggcctccacctggtggaaccagcccaccgtcaccctcaacgacagcggc
ctcacgcccggctccagtcagacgtacacggtgacagccaccgacgcggatgggaactcc
agagccagctcgcctgtcacggtgacgatcgcgagcagttcgacgtcgccgtacgcgagc
accgttctccaggacaacccgtccctgtactaccgcctgggcggaaccgccgtcgattgg
gcgggggccaacaatcctgtgtacggcgccaacgtcacgacggtgactcccggcggtatc
gcggatcagggctcggcggcatcccgtttcgatggtacgaacaagggcatcgtgtccagt
tcgaagacggcctcgacggcgagcagtctgtccgaggagacgtggttcaagacgaccacc
accgagggcggcatgctgatcggttacggcgattcgcagaccggaagctccagcaaccac
gaccgacacgtctatatgacgaacgccgggaagatcgtcttcggtgtctatccgggttcc
gcgcagaccatcaccagtccgcagtcgtacaacgatgggaactggcaccatgtcgtcagc
accctcggcagtgacggcatgaagctgtacctggacggcacgctcgtcgcctcgaacgca
tccgtcacgaccgctcagcccttcaccggctactggcggatcgccggcgacaatgtgggc
ggctggcccaacgcgccgacgtcgaactatttctccgggtcgatgaacgatgtggcgatc
tactcgtccgcgctgactccccagcaggtcgcgcagcactacagcatcggcaaggggctg
actccgccgaccgcggcgttcaccacgacctccgcggacctgaaggcctcgttcgacgcc
tcgggctcgacagcgatgaacggccactcgatcacctcctacgcatggaacttcggcgac
agctccgcggcgggcacagggaagaccgcgacgcacacctacgcctcggccggcacctat
ccggtgaccctcaccgtcaccgatgactcgggtatgacgagcagtgtcaccaactccgtc
acggtgctggccccgaatgatccgcccacggcctccttcaccagcacggcgagcgggctg
acggcgtccgtcgacggcaccgcctcgagcgacccggatggttccctcgtcggctactcg
tgggattggggcgatggaacggctgcgggcaccggcatgaccatggcgcacacctacaac
gaaccggggacctacaccatcaccttgacggtgaccgacaaccggggagggacggcgacc
aagacccgcgatgtgacggtgacccatgcggctccgacggcctcgttcaccgcggtggcg
gatggcctcggggtgtccgccgacggcagcggctcgaccgcgagcgacggagcgacgctg
acctatgcatgggactggggcgacgactcgaccgacggctcgggcaggactgccacccac
acgtacgccgcagccggcacgtactcgatcaagctcaccgtcaccgacagcatgggttcg
accgcgaccaagacccaacaggtcacggtcacagctgtcacctatgcggcctccgacgac
ttcagccgaaccgtcccgtcaggatggggcgccgcggacatcggcggcacctggtccgca
ctgtacggtcccgccgcggacggatccgtcgacggttcccgaggaaacatcaccctgtct
ggcggcaagacacgcaacatggcactggcagggctctcggtgcgagactccgaggcctcg
gtccagttctcactgagctctccgccatcgcagggcagctcatacgtcggcatcgcctca
cgacagtcggccagcagcaactacacagcgcgcgtctggatgaatggcgacggaagcgtg
tggctcctggcgcagcaatccggcaccgatctcaaggtgatgaagatgccgggtctgacc
tggaccaatggcgaggtcttccatctgaagacgaaggtctccggcaccagtccgaccacg
atccaggccaaggtctggaaggacggctcgcccgagcccaccgattggcagttgacgacg
acggattcgactgcggcgctgcaggccgccggatacaccagtgtccagttcgctcgggcg
gcatctgcgaccacgtcctcaacggcgtcgttcgacacgttccgcgtggtcgacctctcg
ccgccgccggccgcgacggccccgaccgcgtcgttcaccgcacagaccaccgacctcaag
accaccgtcgacgcctccgcctccaccgcccaggacggagccaccatctccacctacacc
tgggactggggcgacaactccaccgccggaaccggcaagaccaccaaccacacctacacc
caagccggcacctacaccgtcaaactcaccgtcaaggacagcaacggcctcaccggcacc
accaccaagaccatcaccgccaccgacccaccggccgcgacggccccgaccgcgtcgttc
accgcacagaccaccgacctcaagaccaccgtcgacgcctccgcctccaccgcccaggac
ggagccaccatctccacctacacctgggactggggcgacaactccaccgccggaaccggc
aagaccaccaaccacacctacacccaagccggcacctacaccgtcaaactcaccgtcaag
gacagcaacggcctcaccggcaccaccaccaagaccatcaccgccaccgacggaccgccg
gatctgagctcctacctcgccgccgatggcttcggccgtacggtggcgaccggctggggc
gcctccgacaagggcggagcgtggagcaccctgtacggcggtgccagcgccgcgagcgtg
gccagcgggtccggcaagctcgagatccccacgggcaaggtgaggttccaggcactcaac
ggggtctcggtacaggacgtcctcctggaggcgaacgtctcggccgccgacgcaccggcg
accggccagtcatatgtcggtttcttcgctcgccagaacgcgagcggcgacaactaccag
gtgcgtgtgtggctgcggagcgacggctcggtgtggcttgtcacgcagcacggcaacgac
gtgctcaacacgtatgcggtgccgggagtcacctgggcgagcggcgacagcttcaccgtg
aaggcgcaggtatcgggttccgggaccacgacgatcacggcgaagctgtggaaggccggc
agcactgagccgagcgcctggcagatcacgtcgacggacaccaccgccgcgctccagacc
cccgggacgatcggtgtgtccgccagccggtcctcatccgcgacgacaacggggacgtac
aacttcagccgcttccgcgcgacatcactggcctga
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