Brachybacterium huguangmaarense: BRM3_04010
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Entry
BRM3_04010 CDS
T08617
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRM3_04010 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhq03019
]
BRM3_04010 (recQ)
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_04010 (recQ)
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRM3_04010 (recQ)
Messenger RNA biogenesis [BR:
bhq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRM3_04010 (recQ)
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRM3_04010 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UYG17607
LinkDB
All DBs
Position
923989..925908
Genome browser
AA seq
639 aa
AA seq
DB search
MDDGPLPTSAITNAPDPVDPLAPAASASPSRALDVLSTVFGYDAFRGEQAEIIDHVASGG
DAVVLMPTGGGKSLCYQIPALLRPGTGIVISPLIALMADQVSALDQLGIRAAYLNSTLEP
HEAQAVEQQLLAGELDLLYMAPERLVLPRTLDLLQRAQLALFAIDEAHCVAQWGHDFRPD
YLGLSVLADVFGQVPRIALTATATGETHREITERLRLDDARHFVSSFDRPNIQYRIGPKD
RARDQLLRLIHTEHDGECGIVYCLSRRGVEQTAAWLVEHDVPALPYHAGLDAQVRHAHQE
RFLREDGLVMVATIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGLPSTAWMAY
GLGDVVSQRRFIDAGEGSDQFKRNARAHLDAMLALCETVTCRRVQLLRYFGQESEPCGNC
DTCLNPPETWDATVAAQKLLSAIIRLDRERDQRFGSGQVIDVLLGRANDRSRQSRHAELS
VWGIGQDLSERQWRTALRQLLARGIVEAVGDYGVLVAGAHAGPVLRGEVTVELAVDRAPA
GGKASRSTGTGSRSRPADALEPAQREVFEALRAWRTSVAQDRKIAPYMVFSDATLVGIVE
SRPRTIGALGQVSGVGAKKLAEYGDAVLEVLDEAAPGDR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggccccctccccacctcggcgatcaccaacgcaccggatcccgtcgatccc
ctggccccggcggcgagcgcttcgccctcgcgcgctctggacgtgctgtcgaccgtcttc
ggctacgacgcgttccgcggcgagcaggccgagatcatcgaccacgtcgcctcgggcggg
gatgccgtggtgctcatgccgacgggcggcggcaagtcgctgtgctaccagatccccgcg
ctgctgcggccggggaccggcatcgtcatctcgcctctcatcgcgctcatggccgatcaa
gtctccgccctcgaccagctcgggatccgcgccgcctatctcaactccacgctcgagccg
cacgaggcgcaggccgtcgagcagcagctcctggccggcgagctcgacctgctgtacatg
gcgcccgagcgtctggtgctgccccggaccctcgacctcctgcagcgcgcccagctcgcc
ctgttcgcgatcgacgaggcgcactgcgtcgcccagtgggggcacgacttccgccccgac
tacctggggctgtcggtcctcgcggacgtgttcgggcaggtcccgcgcatcgcgctcacg
gcgaccgccaccggcgagacgcaccgggagatcaccgagcgcctgcgcctcgacgacgcc
cggcacttcgtgtcgagcttcgaccgccccaacatccagtaccggatcggccccaaggac
agggcccgcgaccagctgctgcggctcatccacaccgagcacgacggcgagtgcggcatc
gtctactgcctctcgcgccgcggcgtcgagcagaccgccgcgtggctcgtcgagcacgac
gtgccagccctcccctaccacgcgggtctcgacgcgcaggtccgtcacgctcatcaggag
cgcttcctgcgcgaggacggcctggtcatggtcgcgaccatcgccttcggcatggggatc
gacaagcccgacgtccgcttcgtcgcgcacctggacctgcccaagtcgatcgagggctac
taccaggagaccggccgtgccggccgcgacggcctgccgtcgaccgcctggatggcctac
gggctgggagacgtcgtgagccagcgccgtttcatcgacgccggcgagggcagcgaccag
ttcaagcgcaacgcccgggcccacctggacgcgatgctcgcgctgtgcgagaccgtgacg
tgccgacgcgtgcagctgctgcggtacttcggccaggagtcggagccgtgcggcaactgc
gacacgtgcctgaacccgccggagacctgggatgcgaccgtcgccgcgcagaagctcctc
tcggcgatcatccggctcgaccgtgagcgcgatcagcgtttcggctccgggcaggtgatc
gacgtgctgctgggccgggcgaacgaccgctcgcggcagtcccgccacgccgagctgagc
gtgtggggcatcgggcaggacctctccgagcggcagtggcgcaccgcgctgcgccagctg
ctggcgcgcgggatcgtcgaggcggtgggcgactacggagtgctcgtggccggcgcgcac
gcgggccccgtgctgcgcggcgaggtgacggtcgagctcgcggtcgatcgtgcgcccgcc
ggcggcaaggcctcgcgctcgacggggaccgggtcccggtcgcgcccggcggacgccctc
gagcccgctcagcgggaggtcttcgaggccctgcgggcctggcgcacgagcgtcgcgcag
gacaggaagatcgccccctacatggtgttctccgacgccacgctcgtggggatcgtcgag
tcccgcccccgcacgatcggggcgctcggacaggtgagcggggtgggggccaagaagctg
gccgagtacggggacgcggtgctggaggtgctcgacgaggcggcccccggcgaccgctga
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