Brachybacterium huguangmaarense: BRM3_04130
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Entry
BRM3_04130 CDS
T08617
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bhq
Brachybacterium huguangmaarense
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhq03032
]
BRM3_04130 (gyrB)
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_04130 (gyrB)
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BRM3_04130 (gyrB)
DNA replication proteins [BR:
bhq03032
]
Prokaryotic type
DNA Topoisomerases
BRM3_04130 (gyrB)
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRM3_04130 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HTH_Tnp_Mu_1
Motif
Other DBs
NCBI-ProteinID:
UYG18196
LinkDB
All DBs
Position
complement(942203..944194)
Genome browser
AA seq
663 aa
AA seq
DB search
MNQHYEASDITVLEGLEAVRKRPGMYIGSTGERGLHHLAYEIVDNSVDEAMAGFGDSIEV
TLLADGGVRVVDHARGIPVDMHPTQNKPAVELVLTVLHAGGKFGGGGYAVSGGLHGVGSS
VVNALSTRMEVEIRRQDHVWRQAYRRGVPQSPLDKGEATDETGTTITFWADPEIFETTVY
DFETLRKRFQQMAFLNKGLRITLTDERVQELEPLDDVADAEGKAPEPAGPKTISYRYENG
LRDFVHYINTSKRADVIHPDVIDIEAEDTDVMISVEIAMQWTTAYTESVHTYANTINTHE
GGTHEEGFRSSLTGVVNRYGRAQGIVREKDANLTGEDIREGLTAVVSVKLGEPQFEGQTK
TKLGNTIARTFVSKVMTDHLAAWFEAHPNEARDIVRKAQSAAMAREAARKARDATRRKSP
LETGGMPGKLKDCQSRNPAECEVFIVEGDSAGGSAVMGRDPRTQAILPIRGKILNVEKAR
LDRALDNQEIRSLITAFGTGIGEDFDATKLRYHKIILMADADVDGQHICTLLLTLLFRYM
RPLIELGHVFIAMPPLYRLKWSNAPHEYVFSDSERDARLAEGRAGGKRIPRDNGIQRYKG
LGEMDWKELQTTTMDRDVRTLKQVTVDEAADADAVFAVLMGEDVESRRKFIQENAKDVRF
LDI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcattacgaggcctcggacatcaccgtcctcgaaggcctcgaggccgtgcgc
aagcgtccgggcatgtacatcggctcgaccggcgagcgcgggctgcaccatctcgcctac
gagatcgtcgacaattcggtcgacgaggcgatggccggcttcggcgactcgatcgaggtg
accctgctggccgacggcggcgtgcgcgtggtcgaccatgcgcgcggcatccccgtggac
atgcaccccacccagaacaagccggccgtcgagctcgtgctcacggtgctccacgcgggc
ggcaagttcggcggcggcggctacgcggtctcgggcggcctgcacggcgtgggctcctcc
gtcgtcaacgccctgtccacccggatggaggtcgagatccgccgccaggaccacgtgtgg
cgccaggcctaccgccgcggtgtgccgcagtcgccgctggacaagggcgaggcgaccgac
gagaccggcaccacgatcaccttctgggccgacccggagatcttcgagacgaccgtctac
gacttcgagaccctgcgcaagcgcttccagcagatggccttcctcaacaagggcctgcgg
atcacgctgaccgacgagcgggtccaggagctcgagccgctcgacgacgtcgccgacgcc
gagggcaaggcccccgagccggccggcccgaagacgatctcgtaccggtacgagaacggc
ctgcgcgacttcgtgcactacatcaacacctccaagcgcgccgatgtgatccaccccgac
gtcatcgacatcgaggccgaggacaccgacgtcatgatctccgtcgagatcgcgatgcag
tggaccaccgcctacaccgagtcggtccacacctacgccaacacgatcaacacccacgag
ggcggcacccacgaggagggcttccgctcctcgctgaccggggtggtcaaccgctacggg
cgcgcacagggcatcgtgcgggagaaggacgccaacctcacgggcgaggacatccgcgag
ggcctgaccgccgtcgtctccgtcaagctcggcgagccccagttcgagggccagaccaag
accaagctcggcaacacgatcgcccgcaccttcgtctccaaggtgatgaccgaccacctc
gccgcctggttcgaggcgcaccccaacgaggcccgcgacatcgtgcgcaaggcccagagc
gcggcgatggcccgcgaggccgcgcgcaaggcccgcgacgccacccggcgcaagtcgccg
ctcgagaccggcggcatgcccggcaagctcaaggactgccagtctcgcaatcccgccgag
tgcgaggtgttcatcgtcgagggcgactcggcgggcggctcggccgtcatggggcgcgac
ccgcgcacccaggcgatcctcccgatccgcggcaagatcctcaacgtcgagaaggctcgg
ctggaccgcgccctcgacaaccaggagatccgctcgctcatcacggcgttcggcaccggc
atcggcgaggacttcgacgcgaccaagctgcggtaccacaagatcatcctgatggccgac
gccgacgtcgacggccagcacatctgcaccctgctgctcacgctgctgttccggtacatg
cgccccctcatcgagctgggccacgtgttcatcgcgatgccgccgctgtaccggttgaag
tggtccaacgcgccgcacgagtacgtgttcagcgactccgagcgcgatgcgcgcctcgcg
gagggccgcgcgggcggcaagcgcatcccccgggacaacggcatccagcggtacaagggc
ctgggcgagatggactggaaggagctccagaccacgacgatggaccgcgacgtgcgcacg
ctcaagcaggtcaccgtcgacgaggccgcggacgccgacgccgtgttcgccgtgctcatg
ggcgaggacgtcgagtcccgccgcaagttcatccaggagaacgccaaggacgtccggttc
ctcgacatctga
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