Brachybacterium huguangmaarense: BRM3_07920
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Entry
BRM3_07920 CDS
T08617
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03030
DNA replication
bhq03430
Mismatch repair
bhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRM3_07920 (dnaE)
03430 Mismatch repair
BRM3_07920 (dnaE)
03440 Homologous recombination
BRM3_07920 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhq03032
]
BRM3_07920 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_07920 (dnaE)
Enzymes [BR:
bhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRM3_07920 (dnaE)
DNA replication proteins [BR:
bhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRM3_07920 (dnaE)
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRM3_07920 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol3_alpha_C
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UYG15578
UniProt:
A0ABY6FXC9
LinkDB
All DBs
Position
1769806..1773360
Genome browser
AA seq
1184 aa
AA seq
DB search
MASDDFVHLHVHTDYSLLDGAAKISKLVDETARQGQKAIAITDHGYVFGAYEFYKTAVAA
DIKPIIGVEAYVTPGTSRHDRTRQQWGTKAQQDAGDDVSARGAYTHLTLLSRTTAGMHNL
FRLASSASLDGQMGKWPRMDREILSTYADGLIASTGCPSGEIQTRIRLGQWDEAVKAAGE
FQDMFGKENYFVELMDHGLDLETRVTKDLIALSKQIGAPLLATNDLHYVTEDDAKIQDAL
LCINSGSTFDTPGRFKFDGSGYYLKSAAEMRELFRELPEACDNTLRVAEMCDVSFTTTAE
GANFMPVFPTPPGEDEHSWFVKEVQRGLEYRFSAGIPDAVQKQADYEVSVITQMGFPGYF
LVVSDFIRWAKENGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLLFERFLNPDRVSMPD
FDVDFDDRRRGEVLEYVTRKYGDDRVAQVITYGVMKTKNSLKDASRVLGYPYAMGDRLTK
ALPPAVMGKDIPLSGIYDPENKRYAEAGEFRRMLDEDPDGQKVFEIAQGVEGLTRGWGVH
ACAVIMSSHTLTDIIPMMRRPSDGQIITQFDYPTCETLGLLKMDFLGLRNLTVISDALDN
ITRNGKEAPDLETLGFDDPPTYDLLQRGDTLGVFQLDGSGMRTLLRQMKPDKFGDISAVS
ALYRPGPMGMNSHTNYALRKNGLQEIAPIHPELEAPLADILNETYGVLVYQEQVMQTAQK
VAGYSLGEADILRRAMGKKKKAELDKQFVSFEAGMKERGYSDAAVAALWETLLPFADYAF
NKSHSAAYGVVSYWTAYLKANFPTEYMAALLTSTQENRDRLGLYLGDCRHRGITVLPPDV
NESDMYFSAVGDDIRFGLSAVRNVGANVVEAILAARAEKGAFTSFTDFLDKVPLSVCNKR
TIESLIKGGAFDSLGANRRSLVLIHEDAVDSVVDVKRKEAQGQYDLFGEALFGGDGAETG
SSATITIPDLPEWDRKEKLSFERTMLGLYVSDHPLQGLEHVVAQNSTTAISALADEGAVE
DGAMVQIAGLITSLQRKTTKKGDMWAIATVEDLEGSIDCLLFPSTYQTVATELAEDLVVS
MKGRVDTSKGMPELRVMEMTIPDTSHAGGDGPVTISLPALRCTERVVTDLRGVLEDNPGM
SEVRVKLLEPGRATLMRLDTRLSVTPSAALYASLKALLGPGCLQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacgacttcgtgcacctccacgtccacaccgactactccctcctggacggg
gccgcgaagatctccaagctggtcgacgaaaccgcacgtcagggccagaaagccatcgcc
atcacggaccacggctacgtcttcggcgcctacgagttctacaagaccgcggtggccgcg
gacatcaagcccatcatcggcgtcgaggcctacgtgacccccgggaccagccgccacgac
cgcacgcggcagcagtggggcaccaaggcgcagcaggacgcgggcgacgacgtctccgcg
cgcggcgcctacacgcacctgaccctgctctcgcgcaccacggcgggcatgcacaacctc
ttccgcctcgcctcgtccgcgagcctcgacggccagatgggcaagtggccccgcatggac
cgcgagatcctcagcacctacgccgacgggctgatcgcctcgaccggttgcccctcgggc
gagatccagacccgcatccgcctgggccagtgggacgaggcggtcaaggccgccggcgag
ttccaggacatgttcggcaaggagaactacttcgtcgagctcatggaccacggcctcgat
ctcgagacccgcgtgaccaaggacctcatcgccctctcgaagcagatcggcgcgccgctg
ctggccaccaacgacctgcactacgtcaccgaggacgacgccaagatccaggacgcgctg
ctgtgcatcaactccggctccaccttcgacacccccggccgtttcaagttcgacggctcg
ggctactacctcaagtccgccgccgagatgcgcgagctgttccgtgagctgcccgaggcc
tgcgacaacacgctgcgcgtcgccgagatgtgcgacgtctccttcaccacgacggccgag
ggcgccaacttcatgcccgtcttcccgacgccgcccggcgaggacgagcactcgtggttc
gtcaaggaggtccagcggggactcgagtaccgcttctccgcgggcatccccgacgccgtg
cagaagcaggccgactacgaggtctccgtcatcacccagatgggcttcccgggctacttc
ctcgtcgtgtccgacttcatccgctgggccaaggagaacggcatccgggtgggaccgggc
cgtggctcgggcgccggctcgatggtggcctacgcgatgcggatcacggatctcgacccg
ctcgagcacggcctgctgttcgagcgcttcctgaaccccgaccgcgtctcgatgcccgac
ttcgacgtcgacttcgacgatcgccgccgcggcgaggtgctcgagtacgtgacccgcaag
tacggcgacgaccgggtggcccaggtcatcacctacggcgtcatgaagacgaagaactcg
ctcaaggacgcctcgcgcgtgctcggctacccgtacgcgatgggggatcgcctcaccaag
gcgctgccccccgccgtgatgggcaaggacatcccgctctcgggcatctacgaccccgag
aacaagcgctacgccgaggccggcgagttccgccgcatgctcgacgaggaccccgacggc
cagaaggtcttcgagatcgcccagggcgtcgaggggctgacccgcgggtggggcgttcac
gcgtgcgcggtcatcatgtccagccacaccctgaccgacatcatcccgatgatgcgtcgc
ccctccgacgggcagatcatcacgcagttcgactacccgacgtgcgagacgctcggcctg
ctgaagatggacttcctggggctgcgcaacctcaccgtcatctccgacgccctggacaac
atcacgcgcaacggcaaggaggcgccggatctcgagaccctcggcttcgacgatccgccc
acctacgacctcctgcagcgcggcgacaccctgggcgtgttccagctggacggctcgggc
atgcgcaccctgctgcgccagatgaagcccgacaagttcggcgacatctccgcggtctcg
gccctctaccgtccgggcccgatgggcatgaactcccacaccaactatgcgctgcgcaag
aacgggctgcaggagatcgctccgatccatcccgagctcgaggccccgctcgcggacatc
ctgaacgagacctacggggtgctcgtctaccaggagcaggtcatgcagaccgcccagaag
gtcgcgggctacagcctcggcgaggccgacatcctgcgccgcgccatgggcaagaagaag
aaggcggagctggacaagcagttcgtgtccttcgaggccggcatgaaggagcgcggatac
tccgacgcggccgtcgcggccctgtgggagaccctgctgcccttcgccgactacgcgttc
aacaagtcccactccgccgcctacggcgtggtctcgtactggaccgcctacctcaaggcg
aacttcccgaccgagtacatggcggccctgctcacctcgacccaggagaaccgcgaccgc
ctgggcctgtacctgggcgactgccgccaccggggcatcacggtgctcccgccggacgtc
aacgagtccgacatgtacttctcggccgtcggcgacgacatccgcttcgggctgtcggcg
gtgcgcaacgtcggcgcgaacgtcgtcgaggcgatcctcgcggcgcgcgccgagaagggc
gcgttcacgtcgttcaccgacttcctcgacaaggtgccgctctcggtgtgcaacaagcgc
acgatcgagtcgctcatcaagggcggcgcgttcgactccctcggcgccaaccgccgctcc
ctcgtgctgatccacgaggacgccgtcgactcggtggtcgacgtcaagcgcaaggaggcg
cagggccagtacgacctgttcggcgaggccctgttcggcggcgacggcgcggagaccggg
tcgagcgcgaccatcacgatccccgacctgcccgagtgggaccgcaaggagaagctctcc
ttcgagcgcaccatgctgggcctgtacgtctcggaccaccccctgcagggtctcgagcac
gtggtcgcgcagaactcgacgaccgcgatcagcgcgctcgccgacgagggcgccgtcgag
gacggggccatggtccagatcgcggggctcatcacgtccctgcagcgcaagaccaccaag
aagggcgacatgtgggcgatcgccaccgtcgaggacctcgagggctcgatcgactgcctg
ctgttcccctcgacgtaccagaccgtcgcgaccgagctcgccgaggatctcgtggtctcc
atgaagggacgcgtcgacacctccaagggcatgcccgagctgcgcgtcatggagatgacg
atccccgacacctcccacgcgggcggcgacggcccggtgacgatctcgctcccggcgctg
cgctgcaccgagcgggtcgtgaccgacctgcgcggcgtgctcgaggacaacccgggcatg
agcgaggtccgcgtcaagctgctcgagcccggccgcgccaccctcatgcggctcgacacc
cggctctcggtcaccccgtcggccgcgctgtacgcctcgctcaaggcgctgctgggcccc
ggctgcctgcagtga
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