Brachybacterium huguangmaarense: BRM3_09255
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Entry
BRM3_09255 CDS
T08617
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhq
Brachybacterium huguangmaarense
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhq03032
]
BRM3_09255
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_09255
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRM3_09255
DNA replication proteins [BR:
bhq03032
]
Prokaryotic type
DNA Topoisomerases
BRM3_09255
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRM3_09255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UYG15832
LinkDB
All DBs
Position
complement(2044585..2045553)
Genome browser
AA seq
322 aa
AA seq
DB search
MARLRTAHPGTDPGIRRRRRGRGWSFVHDNGRAVSAEDRERALALVLPPAWTDVWIAADP
LAHIQATGIDDAGRTQYRYHDEWGERRERLKHERALDLAETLPSLRRQVTRDLGEPGLGR
ERVLAAALRMLDLVAIRAGGDTYADERGTRGLMTLLVRHATVDGDSGAIRLRFPAKSGQR
FDVTLEDRDLARCLAELRSHRSGASRLLAFRDGKGVHPLHDRDLNDAVRGATGGEFTAKD
FRTLHGTILAATSLARARDVGSARERAAAERAAVAEVAEALGNTVAVARSSYIDPEVFSR
FEEGETIDLRGSREKAILRLLR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcctgcgcaccgcccaccccggcaccgatcccggcatccggcggcgacgccgc
ggccgcggctggtccttcgtgcacgacaacggccgcgcggtgtcggccgaggaccgggag
cgggcgctcgcgctcgtcctgccgcccgcctggaccgacgtgtggatcgccgccgatccc
ctcgcgcacatccaggcgacggggatcgacgacgcggggcgcacgcagtaccgctatcac
gacgagtggggcgagcgccgcgagcgcctcaagcacgagcgcgccctcgacctggccgag
acgctgccctccctgcgccgccaggtgacgcgcgacctgggcgagcccgggctgggccgc
gagcgggtgctcgcggcggcgctgcgcatgctcgacctcgtcgcgatccgagccggcggg
gacacctacgccgacgagcgcggcacgcgggggctgatgacgctgctcgtgcgtcatgcg
acggtcgacggggactccggcgccatccgtctgcgcttccccgcgaagtcggggcagcgc
ttcgacgtgaccctcgaggaccgggacctcgcgcgctgcctcgccgagctgcgctcgcac
cgctcgggggcgtcgcgactgctcgcgttccgcgacggcaaaggcgtgcatcccctgcac
gatcgcgatctcaacgacgccgtgcgcggcgcgacgggcggcgagttcaccgccaaggac
ttccgcaccctgcacggcacgatcctggcggccacgtccctcgcgcgggcgcgggacgtg
ggctcggcccgcgagcgggcggcggcggagcgggctgccgtggccgaggtcgccgaggcg
ctcggcaacacggtcgcggtcgcgcgctcgagctacatcgatcccgaggtgttctcgcgc
ttcgaggagggcgagacgatcgatctgcgcggctcgcgcgagaaggcgatcctgcgcctg
ctgcgctga
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