Brachybacterium huguangmaarense: BRM3_10270
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Entry
BRM3_10270 CDS
T08617
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRM3_10270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhq03019
]
BRM3_10270
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_10270
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRM3_10270
Messenger RNA biogenesis [BR:
bhq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRM3_10270
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRM3_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_20
HEM4
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
UYG16016
UniProt:
A0ABY6FZJ0
LinkDB
All DBs
Position
complement(2252461..2254686)
Genome browser
AA seq
741 aa
AA seq
DB search
MTTPTSPTAVDPDLVGPGLEDEALAALKDLTGRADARFHAGQLEAIEALVAGHRRALVVQ
RTGWGKSAVYFLAALLQRRRGSGPALIVSPLLALMRDQVAAAARAGVRAEAINSANPTQW
GEIERRLAEDSVDVLLVSPERLVNPRFRDEQLPRLIERCGLLVIDEAHCISDWGHDFRPD
YRRLRDLVASLPAGVPVLATTATANGRVVDDVAEQLGHGGEDVLTLRGPLTRDSLRLGCL
ALPDDRARLEYLVARLDAFEGSGIIYTLTVSAAEDLAQLLDRPGRRVRAYTGRTDAEERA
ELEQALKDNEVKALAATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRATASADV
LLLPGHEDRRIWEYFATASMPSEQSARAVLGALEASAAPLSTPALEARVDVKRSALELLL
KVLAVDGAVEAVRGGWVSTGAAWSYDAERYANVARTRREEQEAMLAYEHLGPHDDPGCRM
VFLARQLDDTTAEPCGRCDLCTGPWFPAAGGLGRGADEQGGSVDEVDRLLARVGVPVEPR
AQWPQGLDRLHVVDEGGRTPRGRIPEGERAESGRALARLSDLGWGQRLRELLATDAEGNR
VDGTVPSDLGRRIVEVLAQWDWAERPRAVVAVPSVTRPGLVASMAHGIAAVGRLEDLGTL
DLAPGSGPLRPGGNSAFRVADLWERFAVGPELARGLEALDGAPVLLVDDEIGTRWTMTVA
ARLLRRAGSGPVLPLVLALEG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgacctcccccaccgccgtcgacccggatctcgtcggcccgggcctcgag
gacgaggccctcgccgccctgaaggacctcaccggccgggccgacgcccgcttccacgcg
ggtcagctcgaggcgatcgaggcgctcgtcgccgggcatcggcgcgctctcgtggtccag
cgcaccgggtggggcaagtccgccgtctacttcctcgccgccctgctgcagcggcggcgc
ggctcgggcccggccctgatcgtctcccctctgctggccctcatgcgcgaccaggtcgcg
gcggcggcccgggcgggcgtgcgggccgaggccatcaactcggccaacccgacccagtgg
ggcgagatcgagcgccggctcgcggaggacagcgtcgacgtcctgctcgtctcccccgaa
cgtctcgtcaacccgcgcttccgcgacgagcagctgccgcggctgatcgagcgctgcggg
ctgctcgtgatcgacgaggcccactgcatctcggactggggccacgacttccggcccgac
taccggcgactgcgcgacctcgtcgcgtcgctgcccgcgggggtgccggtgctcgcgacg
accgcgaccgccaacggccgcgtggtggacgacgtcgccgagcagctcggccacggcggc
gaggacgtgctcaccctgcgcggtccgctcacgcgcgactccctgcggctcggctgcctc
gccctgccggacgaccgggcgcgcctggagtacctcgtggcgcggctcgacgcgttcgag
ggctcgggcatcatctacaccctgaccgtctcggcggccgaggacctggcccagctgctg
gaccggcccggccggcgggtgcgcgcctacacggggcgcaccgacgccgaggagcgcgcg
gagctcgagcaggcgctcaaggacaacgaggtcaaggcgctcgcggcgacgagcgcgctg
ggcatggggttcgacaagcccgacctcggcttcgtcatccacctgggtgcgccgagctcg
cccgtcgcctactaccagcaggtggggcgtgccgggcgtgcgaccgcgagcgccgacgtg
ctgctgctgcccggccacgaggaccgccgcatctgggagtacttcgcgaccgcgtcgatg
ccgagcgagcagagcgcccgggccgtgctgggggctctcgaggcgtccgccgcgccgctg
tccacccctgccctcgaggcgcgggtggacgtcaagcgctcggcgctcgagctgctgctg
aaggtgctcgcggtcgacggcgccgtcgaggcggtccgcggcggctgggtgtccacgggg
gccgcctggtcctacgacgccgagcgctacgcgaacgtcgcccgcacgcgccgcgaggag
caggaggcgatgctggcctacgagcacctgggcccccacgacgaccccggctgtcggatg
gtcttcctcgcccgccagctcgacgacacgacggccgagccgtgcgggcgctgcgacctg
tgcacgggcccctggttccctgccgcgggcggcctcggccggggagccgacgagcagggc
gggagcgtcgacgaggtcgaccggctgctcgcgcgggtcggggtgcccgtcgagccgcgt
gcccagtggccgcaggggctcgaccgtctgcacgtcgtcgacgagggcggcaggaccccg
cggggacgcatccccgagggcgagcgggccgagagcgggcgggcgctcgcccgcctgtcg
gacctgggctggggccagcggctccgggagctgctcgcgaccgacgccgaggggaaccgg
gtcgacgggaccgtgccgtccgacctcggccgccggatcgtcgaggtgctcgcgcaatgg
gactgggccgaacgcccccgggcggtcgtcgcggtcccctcggtcacgaggccggggctc
gtcgcgtcgatggcgcacggcatcgccgccgtcggccgcctcgaggacctcgggacgctc
gacctcgcgccgggatcggggccgctgcgaccgggcggcaacagcgccttccgcgtcgcc
gacctgtgggagcgcttcgcggtgggccccgagctcgcccgtggcctcgaagccctcgac
ggcgcgccggtcctgctggtcgacgacgagatcgggacccggtggaccatgaccgtcgcc
gcgcgcctgctgcgtcgcgcgggctccggaccggtcctgccgctcgtcctcgcgctcgag
gggtag
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