Brachybacterium huguangmaarense: BRM3_11085
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Entry
BRM3_11085 CDS
T08617
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03030
DNA replication
bhq03430
Mismatch repair
bhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRM3_11085 (holA)
03430 Mismatch repair
BRM3_11085 (holA)
03440 Homologous recombination
BRM3_11085 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhq03032
]
BRM3_11085 (holA)
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_11085 (holA)
Enzymes [BR:
bhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRM3_11085 (holA)
DNA replication proteins [BR:
bhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRM3_11085 (holA)
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRM3_11085 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
ABC1
Motif
Other DBs
NCBI-ProteinID:
UYG16158
LinkDB
All DBs
Position
2427793..2428782
Genome browser
AA seq
329 aa
AA seq
DB search
MVDVAWHSVDLAPLVLLHGSEPLLAQRALERLREQARHRDPETAFHEIRSEAATAGSLAQ
VASPSLFGESRFVVVPDLQSAPETLVAEIDAYRSAPEPDVTLVLIHRGGNRGKRLLDALR
RSDVPRVPCDPIKRPADKQTFVTAEFTRHDRRIQPDAAAALVDAFGGDLSELAAIARQLL
EDTVPDDPSAAPPPVTLAAVRTLTAGRVESTAFAVADAAIAGREGDALVLLQQASLAGVD
PVPLVAAVASKMRSLAKVTVPGASARTLGMPDWMLRNLSREARAWNDRSLARALDAVARA
DHEVKGAGRDPQWSVQRMVTEICRARRAR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgtcgcgtggcactccgtggacctcgccccgctcgtcctgctgcacggctcc
gagccgctcctggcccagcgcgccctcgaacggctgcgcgagcaggcacgccaccgggac
cccgagaccgccttccacgagatccgctcggaggccgcgaccgccggctccctcgcccag
gtcgcgagcccctccctgttcggcgagtcgcgcttcgtcgtcgtcccggacctccagtcc
gccccggagaccctcgtcgccgagatcgacgcctaccgctcggcccccgagcccgacgtg
acgctcgtcctcatccaccgcggcggcaaccgcggcaagcgcctgctcgacgccctgcgc
cgctccgacgtgccccgcgtcccgtgcgatcccatcaagcggcccgccgacaagcagacc
ttcgtgaccgccgagttcacgcggcacgaccgccggatccagcccgacgcggccgccgcg
ctcgtcgacgccttcggcggcgacctgtccgagctcgccgccatcgcccggcagctcctc
gaggacacggtccccgacgacccctcggcggccccgccccccgtcaccctggccgcggtg
cgcacgctgaccgccgggcgggtcgagtcgaccgccttcgccgtcgccgacgccgcgatc
gccggacgcgagggggacgccctcgtgctgctccagcaggcgagcctcgccggcgtggac
cccgtgcccctggtcgccgcggtcgcctcgaagatgcgctcgctggccaaggtcaccgtg
cccggggcgagcgcccgcaccctcggcatgcccgactggatgctgcgcaacctctcgcgc
gaggcccgcgcctggaacgaccgctcgctcgcgcgagctctcgacgcggtcgcgcgcgcc
gaccacgaggtcaagggcgccggccgcgacccgcagtggtccgtgcagcgcatggtcacc
gagatctgccgcgcgcgccgcgcgcgctga
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