Brachybacterium huguangmaarense: BRM3_12860
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Entry
BRM3_12860 CDS
T08617
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bhq
Brachybacterium huguangmaarense
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhq03032
]
BRM3_12860
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_12860
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BRM3_12860
DNA replication proteins [BR:
bhq03032
]
Prokaryotic type
DNA Topoisomerases
BRM3_12860
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRM3_12860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
FliT
Motif
Other DBs
NCBI-ProteinID:
UYG16484
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Position
2794603..2797065
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AA seq
820 aa
AA seq
DB search
MPARRTTSSSTPEGEENVDGTILDVDVTSEMETSFLEYAYSVIYSRALPDARDGLKPVQR
RILYTMDTMGLRPDRGHVKSQRVVGDVMGKLHPHGDSAIYDALVRMAQPFAMRLPLVDGH
GNFGSLDNGPAAARYTEARPSRAATLMTDSLDEDVVDMVPNYDNQLLQPSVLPAQFPNLL
VNGASGIAVGMATNMAPHNLVEVIAAARHLLAHPDASLEDLMRLVPGPDLPTGGRIVGLD
GIRDAYRTGRGSFRIRATARIENVTSRKKGIVVTELPYLVGPEKVAEKLRDAVQAKKVQG
ISDYQDLTDRHHGLRLVMTVKSGFNPEAVLEQLYKHTPMEDSFGINNVALVDGQPRTLGL
VALLEVFIAHRLEVVRRRTEHRLGRRRHRLHLVEGLLIAILDIDEVIQIIRSSDDAETAR
TRLMQVFDLSEVQAEYILELRLRRLTRFSRIELEGERDELRAEIERLEEILGSDEVLRAL
VSAELAQVAAEHGTPRRTVLLEASAQPVAALGADLEVADEPCRVLLTGTGLVARLAGDEP
LVRDGGRSAHDVVVAEVLTSARATVGVVTSAGRLLHLSVVDLPAIAPTAGPPSLAGGARL
ADLVALERGERIVALVRAAAGDLERGGGFALGTRDGVVKRVTPDLPRGDGFEIIALKGDD
EVVGAVDLESDQDLDLVFVTTDAQLLHFPASGVRPQGRGAGGVAGVKLAAGARVLAFTAV
DVTREAEVVTIAGSAGALPTTQTGSLKVTALTEYPAKGRATGGVRCHRFLRGEDALIGAW
VVPSPARACSEAGQPIDLPAPLGRRDGSGSPVAVPVAAVG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacgcaggaccaccagcagcagcacgcccgagggcgaggagaacgtcgacggc
acgatcctcgacgtcgacgtcacgagcgagatggagacgtcgttcctcgagtacgcgtac
tcggtgatctactcgcgcgccctgccggacgcgcgcgacggcctcaagcccgtgcagcgc
cgcatcctctacacgatggacacgatggggctgcgccccgatcgcgggcacgtgaagtcc
cagcgcgtggtgggcgacgtgatgggcaagctgcacccgcacggcgactccgccatctac
gacgcgctcgtgcgcatggcccagccgttcgcgatgcgcctgccgctcgtggacgggcac
ggcaacttcggctcgctcgacaacgggccggccgccgcgcgctacacggaggcgcggccc
tcgcgggccgcgacgctcatgacggactcgctcgacgaggacgtcgtggacatggtgccc
aactacgacaaccagctgctccagccctcggtgctgcccgcccagttccccaacctcctg
gtcaacggggcctccgggatcgcggtgggcatggccacgaacatggcgccccacaacctg
gtcgaggtgatcgccgcggcccgtcatctgctcgcccaccccgacgcgtcgctcgaggac
ctcatgcgcctcgtgcccggccccgacctgcccacgggcggccgcatcgtcgggctcgac
gggatccgcgacgcctaccggaccggccgcggctcgttccggatccgggcgaccgcgcgc
atcgagaacgtgacgagccgcaagaagggcatcgtcgtcaccgagctgccctacctggtg
ggccccgagaaggtggccgagaagctgcgcgacgccgtccaggccaagaaggtccagggc
atcagcgactaccaggacctcacggaccgccaccacggcctgcgcctcgtgatgacggtg
aagtccggcttcaacccggaggccgtgctcgagcagctctacaagcacacgccgatggag
gactccttcggcatcaacaacgtcgccctcgtggacggccagccgcgcacgctcggcctc
gtggcgctgctcgaggtgttcatcgcccatcgcctcgaggtggtgcggcgccgcaccgag
caccgcctggggcgccgccggcaccggctgcacctcgtcgagggcctgctgatcgcgatc
ctcgacatcgacgaggtcatccagatcatccgctcgagcgacgacgccgagaccgcgcgc
acccgcctcatgcaggtgttcgacctgtccgaggtccaggccgagtacatcctcgagctg
cgcctgcggcgcctgacgaggttctcccgcatcgagctcgagggcgagcgggacgagctg
cgcgccgagatcgagcgcctcgaggagatcctcggctccgacgaggtgctgcgcgccctc
gtgtccgccgagctcgcccaggtcgccgccgagcacggcaccccgcggcgcacggtgctg
ctcgaggcctcggcccagcccgtcgcggccctcggcgccgacctcgaggtcgcggacgaa
ccgtgccgggtgctgctgaccggcacgggcctcgtggcccggctcgcgggcgacgagccg
ctcgtgcgcgacggcggccgcagcgcccacgacgtcgtcgtcgcggaggtcctgacctcg
gcgcgcgcgaccgtcggcgtggtcacgagcgcgggccgtctgctgcacctctcggtcgtc
gacctgcccgcgatcgcgcccaccgcgggcccgccctccctcgcgggcggcgcccgcctc
gccgatctcgtggccctcgagcgcggcgagcggatcgtcgcgctcgtgcgcgcggccgcc
ggggacctcgagcggggcggcggcttcgcgctcggcacccgcgacggcgtggtcaagcgc
gtgacgccggacctcccgcgcggcgacggcttcgagatcatcgcgctcaagggcgacgac
gaggtggtcggcgccgtggacctcgagtccgatcaggacctcgatctcgtgttcgtgacg
accgacgcccagctcctgcacttcccggcctccggggtgcgcccgcagggccgcggcgcg
ggcggcgtagcgggcgtcaagctcgccgccggcgcgcgggtcctcgccttcacggccgtc
gacgtgacccgcgaggcggaggtggtgacgatcgcgggcagcgctggcgcgctcccgacc
acccagaccggctcgctcaaggtcaccgcgctcacggagtaccccgccaaggggcgtgcc
acgggcggcgtgcgctgccaccgcttcctgcggggcgaggacgcgctcatcggcgcgtgg
gtggtcccctcgcccgcccgcgcctgctcggaggccggccagccgatcgacctcccggcc
ccgttgggacggcgcgacggctcgggctcgccggtcgcggtgcccgtcgccgccgtgggc
tga
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