Brachybacterium huguangmaarense: BRM3_13045
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Entry
BRM3_13045 CDS
T08617
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRM3_13045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhq03019
]
BRM3_13045
03009 Ribosome biogenesis [BR:
bhq03009
]
BRM3_13045
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRM3_13045
Messenger RNA biogenesis [BR:
bhq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRM3_13045
Ribosome biogenesis [BR:
bhq03009
]
Prokaryotic type
rRNA helicases
BRM3_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
UYG16519
UniProt:
A0ABY6G1H9
LinkDB
All DBs
Position
2835190..2837034
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AA seq
614 aa
AA seq
DB search
MIDHAPSPSTAESSEAPSQPEGPTFADLDLPAPLQRAVATLGFTTPSPIQAQAIPALLDG
RDVIGVAQTGTGKTAAFGLPLLTAVDPADRSTQAIVMAPTRELAMQVADAIGSFAHDVDG
LSVTAVYGGSPYGPQERALSKGAQVVVGTPGRVIDHLKKGNLRLDTVKYVVLDEADEMLR
MGFAEDVEEILSYTPATKQVALFSATMPPAIQKVAADHMTDPVSVSVARQSSTVTSVRQR
YAVVPFRHKTGALARVLATSDADAAIVFVRTRSAAEEVGVELVARGVVAATISGDVAQNE
RERIVERLRNGTLDVLVATDVAARGLDVERIGLVVNFDVPGEPEAYVHRIGRTGRAGRTG
EALTFVAPHERRKLRAIEKTTRQTLEEIQVPSPADVSRHRMKKLLERVPERAEKGRLGIY
TELVGEFLATSGTDPAQLAAVLGAIAVGDEGPGTRTEEEEFTGASLKGQDRPERGGRDDD
RRSGGPRPSSKGYTAYRIGVGHSHGAKPPAIVGTITGEGGLTGKDIGKIDILGSFSLVEV
RGELSEEQLARIGRARIAGRALRIAKDTGPKSGGAKKFNPRHDDRGDRRFDKRGQYDKRD
RTGDRYDRHGARRP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccacgcccccagcccgtccaccgccgagagcagcgaggccccctcgcagccc
gaaggcccgaccttcgccgacctcgacctgccggcacccctgcagcgagcggtcgccacc
ctcggcttcacgaccccctcccccatccaggcgcaggcgatccccgccctcctggacgga
cgcgacgtgatcggcgtcgcgcagaccggcaccggcaagacggccgccttcggcctgccc
ctgctgaccgcggtcgaccccgcggaccgctcgacgcaggcgatcgtgatggcccccacg
cgcgagctcgcgatgcaggtggccgacgcgatcggctccttcgcccacgacgtcgacggc
ctgtcggtcaccgccgtctacggcggctccccctacggcccccaggagcgggcgctgtcc
aagggcgcgcaggtcgtggtgggcacgcccggtcgcgtgatcgatcacctcaagaagggc
aacctgcgcctggacaccgtgaagtacgtcgtgctcgacgaggccgacgagatgctgcgc
atgggcttcgccgaggacgtcgaggagatcctctcctacaccccggccacgaagcaggtc
gcgctgttctccgcgaccatgcccccggccatccagaaggtcgcggccgaccacatgacc
gaccccgtgagcgtgtccgtcgcccgccagtcctcgaccgtcacgtcggtgcgccagcgc
tacgccgtcgtcccgttccggcacaagaccggtgcgctcgcgcgcgtgctcgcgacctcc
gacgccgatgccgcgatcgtcttcgtgcgcacccgctcggcggccgaggaggtcggcgtc
gagctcgtggcgcgcggcgtcgtggccgcgaccatcagcggcgacgtcgcgcagaacgag
cgcgagcggatcgtcgagcgcctgcgcaacggcaccctcgacgtgctcgtcgcgaccgac
gtggccgcccgcggcctcgacgtcgagcgcatcgggctcgtcgtgaacttcgacgtgccg
ggcgagccggaggcgtacgtccaccgcatcggccgcaccggccgcgccggccgcacgggc
gaggccctcaccttcgtcgcgccccatgagcgccgcaagctgcgcgcgatcgagaagacg
acccggcagaccctcgaggagatccaggtcccctcccccgccgacgtctcccggcatcgc
atgaagaagctgctcgagcgcgtgcccgagcgcgccgagaaggggcgcctgggcatctac
accgagctcgtgggcgagttcctcgcgacctccggcaccgacccggcccagctcgcggcc
gtgctgggtgcgatcgcggtgggcgacgagggccccggcacccgcaccgaggaggaggag
ttcacgggcgcctcgctcaagggccaggaccggcccgagcgcggcggccgcgacgacgac
cgccgcagcggcggcccccggccctcgtccaagggctacaccgcctaccgcatcggggtg
ggccacagccacggcgccaagccgccggccatcgtcggcaccatcaccggtgagggcggc
ctgaccgggaaggacatcggcaagatcgacatcctgggctcgttctccctggtggaggtg
cgcggcgagctgtccgaggagcagctggcccggatcggccgggcccggatcgcgggccgc
gccctgcggatcgccaaggacacgggcccgaagtccggcggcgccaagaagttcaacccc
cgccacgacgaccgcggcgatcgccgcttcgacaagcgcggccagtacgacaagcgggat
cgcacgggcgaccgctacgaccgccacggcgcccgccgcccctga
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