Brachybacterium huguangmaarense: BRM3_14510
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Entry
BRM3_14510 CDS
T08617
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhq
Brachybacterium huguangmaarense
Pathway
bhq03420
Nucleotide excision repair
bhq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRM3_14510
03430 Mismatch repair
BRM3_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhq03400
]
BRM3_14510
Enzymes [BR:
bhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRM3_14510
DNA repair and recombination proteins [BR:
bhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRM3_14510
MMR (mismatch excision repair)
Other MMR factors
BRM3_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
UYG18285
LinkDB
All DBs
Position
complement(3148256..3151678)
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AA seq
1140 aa
AA seq
DB search
MPPSPPLSALRLAELMGRPLPTPEQAAVIEAPLAPLLVVAGAGSGKTETMASRVVWLIAN
ALVEPRQVLGLTFTRKAAHELTERITTRLAALGDALRDEGLAVPPGLDRTGDDLLGQRPA
VHTYNGFALDLVTEHALAVGLDPEFTMLSPSASWQLAHEIVESSGDELAIDASPATLTAA
LVSLTSSLADHLVDPADLGEHLARMRDHLIRIPLQTEGRRRTPPERVKKAIAALDARLAL
LPLVERFARARRERAALDFSDQVTLAASIAREIPAAGALARDLHRVVLLDEFQDTSVAQL
ELLSGLFGAGHATCAVGDPQQAIYGWRGASSASLAGFAAAFGTPEQPVLQRTLSTSWRND
QAPLAVANRIAAPLRRASGAVAIPELTARPDAGEGAVEVVEAADERSEARAIARWILERR
AESAPETAGERPPVPSAAVLVRARRQIPPLVEELEAAGLEVEVVGLGGLLHRPEVADVRA
LLECVDDPGRGDSLMRLLAGPRVRLGARDMAVLGRWREHLGARLRRRAGTTAVAPDDADE
VTLLDAVDDLPPEDWTDREGRALSTTARDRLRDLQGILRGMRRRISLPLPDLVTAAISAL
GVDLALLSAPDVDTRHALHDLEAFRDYAAEFERTALRPGLGAFLALLEVSEDKEAALAVT
SRGLEPDPRAVTIVTMHSAKGLEWDLVAVAGLAEGTVPSYDLRRARTAEDGSVRVPDPGW
LGPLADAEVPTELRGDADILPELRWAEADTQVEADGILEEFYDELGHEALREDRRLVYVA
VTRARRRLLLSSAAWRAGRVTSQPRSRYLVEALPVVPAPFHRREEIPEENPLSVSARHAV
WPPVPGPREAARSRAAALVERARLDPAAIPPLLEAGPAGQEPDGRGAGAEDDLVEQTRRV
LADMAARRGDVTVRSPARLSASQIVARAQDPEGAPLELLRPLPRRPSASARRGTEFHAWL
EHRFGAGTLLELEDIEEIADLDRPDPDEAGGVEHAAAQDRARLRAAFEESIWVDRTPLAV
EEPVTVTIGTTSVRGVIDAVYPDEASQAPAGGVVIVDWKTGRRPTGARRRARAVQLSVYR
LAWHERTGLPLESIRTMFHYVGENVTDEVTEHPEREELARLLGGAETAETGEGAKASGAD
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgagccctccgctctccgccctccgcctcgccgagctgatggggcgccccctg
cccacccccgagcaggccgccgtgatcgaggcgcccctcgcgccgctgctcgtcgtcgcc
ggcgccggcagcggcaagaccgagacgatggcctcccgcgtggtgtggctgatcgccaac
gcgctcgtcgaaccccggcaggtgctcggcctcaccttcacccgcaaggcggcgcacgag
ctcaccgagcgcatcacgacccggctcgccgccctcggcgacgcgctgcgcgacgagggc
ctcgccgtgccgccggggctcgaccgcacgggcgacgacctgctgggccagcgccccgcc
gtgcacacctacaacggcttcgcgctcgacctcgtgaccgagcacgcgctcgccgtcggg
ctcgaccccgagttcacgatgctgtcgccgtctgcctcgtggcagctcgcccacgagatc
gtcgagtcctcgggcgacgagctggcgatcgacgcctcgccggccacgctcaccgccgcg
ctcgtctcgctcacgtcctccctcgccgaccacctcgtcgatcccgccgacctcggcgag
cacctggcgcggatgcgggaccacctgatccggatcccgctgcagaccgagggccggcgg
cgcacgccgcccgagcgggtgaagaaggcgatcgcggcgctcgacgcccggctggccctg
ctcccgctcgtcgagcgcttcgcccgggcacgccgcgagcgggccgccctggacttctcc
gatcaggtcacgctcgccgccagcatcgcccgcgagatccccgccgcgggggcgctcgcc
cgcgacctgcaccgcgtggtcctgctcgacgagttccaggacacctccgtggcccagctc
gagctgctctccggcctcttcggcgcgggtcatgcgacgtgcgccgtgggcgacccgcag
caggccatctacggctggcgcggcgcctcgagcgcctcgctcgcgggcttcgccgctgcc
ttcggcacgcctgagcagccggtcctgcagcgcaccctgtccacgtcgtggcgcaacgac
caggccccgctcgccgtggccaaccggatcgccgcgccgctgcgccgcgcctcgggcgcc
gtcgccatccccgagctcacggcgcgcccggacgcgggagagggcgccgtcgaggtggtc
gaggccgccgacgaacgctccgaggcccgcgcgatcgcgcgctggatcctcgagcgccgc
gccgagtccgcaccggagacggccggggagcggcctccggtcccgagcgccgccgtgctc
gtgcgcgcccgccgccagatcccgccgctcgtcgaggagctcgaggccgcgggcctcgag
gtcgaggtggtgggactgggcggcctcctgcaccgtcccgaggtggccgacgtgcgcgcc
ctcctggaatgcgtcgacgatcccgggcgcggcgactccctcatgcgcctgctcgccggg
ccccgcgtccggctcggggcgcgggacatggccgtgctcggccgctggcgcgagcacctc
ggggcacgcctccgccgccgcgcgggaacgaccgccgtcgcccccgacgacgcggacgag
gtcaccctgctcgacgccgtcgacgacctgccgccggaggactggaccgatcgcgagggc
cgggccctcagcacgaccgcccgcgaccggctgagggacctgcaggggatcctgcgcggc
atgcgccggcgcatctcgctgcccctgccggacctcgtgaccgcagcgatcagcgcgctc
ggcgtcgacctcgcgctgctctcggccccggacgtcgacacccgtcacgccctccacgac
ctcgaagccttccgcgactacgccgccgagttcgagcgcacggcgctgcgccccggcctc
ggcgccttcctcgcgctgctcgaggtgagcgaggacaaggaggcggcgctcgcggtcacc
tcacgcgggctcgagcccgacccccgcgccgtgaccatcgtgacgatgcactcggccaag
ggcctcgaatgggacctcgtggcggtcgcggggctcgccgagggcacggtccccagctac
gacctgcgccgggcgcgcaccgcggaggacggctccgtgcgtgtgcccgatcccggctgg
ctggggcccctcgccgacgccgaggtgcccaccgagctgcgcggcgacgccgacatcctc
ccggagctgcgctgggcggaggccgacacccaggtcgaggccgacgggatcctcgaggag
ttctacgacgagctgggccacgaggccctgcgcgaggaccgccgtctcgtgtacgtcgcg
gtgacacgggcgcgccggcgtctgctgctgtcgtccgcggcctggcgcgcgggacgcgtc
acctcccagccccgctcgcgctacctcgtcgaggccctgcccgtcgtgcctgcccccttc
caccgtcgcgaggagatccccgaggagaacccgctctcggtctccgcccggcacgccgtc
tggccgcccgtccccgggccgcgcgaggcggcccggtcccgcgccgcggcgctcgtcgag
cgggcacgcctcgaccccgccgcgatcccgcctctgctcgaagccggacccgccgggcag
gagccggacggcaggggcgcgggagcggaggacgacctcgtcgagcagacccgccgggtg
ctcgccgacatggccgcgcgccgcggcgacgtgaccgtgcgctccccggcccgcctgtcg
gcctcccagatcgtggcccgagcccaggaccccgagggcgcgccgctcgagctgctgcgc
ccgctcccgcgccggccctcggcctcggcacgccggggcaccgagttccacgcgtggctc
gagcaccgcttcggcgcgggcacgctcctcgagctcgaggacatcgaggagatcgccgac
ctggaccggcccgatcccgacgaggccggcggcgtcgagcacgcggcggcgcaggaccgg
gcgcgcctgcgggccgccttcgaggagtcgatctgggtcgaccgcacgccgctcgccgtc
gaggagccggtcaccgtcacgatcggcaccacgagcgtgcgcggcgtgatcgacgccgtc
tatccggacgaggcgtcgcaggcgccggccggcggcgtcgtcatcgtcgactggaagacg
ggccgacgccccacgggggcgcgccgtcgtgcccgcgcggtgcagctgtccgtgtaccgc
ctggcctggcacgagcgcaccgggctcccgctcgagagcatccgcacgatgttccactac
gtcggcgagaacgtcaccgacgaggtgaccgagcatcccgagcgcgaggagctcgcacgc
ctgctcggcggcgcggagacagcagagacaggggagggtgcgaaggcctccggcgccgac
tga
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