Brachybacterium huguangmaarense: BRM3_14515
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Entry
BRM3_14515 CDS
T08617
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
bhq
Brachybacterium huguangmaarense
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
DUF2800
DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UYG16792
LinkDB
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Position
complement(3151684..3154995)
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AA seq
1103 aa
AA seq
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MPAATSRPDASRARVRLLPPDPAAVPHPLGDAALPAQRRALAAFARGEDVLVHGAPGSGR
TRLALTAALEASGAEVLLLSPRRASAGLLRDAVAQAGGVSRVRVATPAAYGFSVVRAAAA
RDGRGEPTLVTGAEQDALVRDLISSVETWEVDVDAATRTLPGFRAELRDVISRANELGLL
PADLEHLAARRGRTAWWDAAHVLRLYLDVLDLEAAAALDAGPRHDAGAMVRRAAEIVAAG
PSASGAAVGAVGTVVVDDAQDLTAAGIALVRALRDAGAHVLVTSCPDAVVDSFRGAVPDA
ARRILPVVRGPRPGRAVHEAALPAMLRSPRGARPVLESLRGRLPLAGAPAASRRGIASSR
DDGAAPAGTADVPGAVSVLRCASPIEEARQIAGVLRDLHHAHAVAYDEMAIVCRSGAAVD
DLADLLQREGLPVTAARRPRALRDERVVADLLGILEIALAGTVPTPEHAAELLRGPFGDA
DALRLRRIRRLLLHAHDATEASDAPQAGRREGEEEPPTTGSAELLARALVEEHVPGLPEP
RERDRAAAPVHRVRRMIAAVRALGPAPAAVDALWAAWDAAQVAEGWRTASLETDDLDGAG
ARGRLAARRLDAVTALFAAVERFTERRPGADASGFVEQIRDQAVAEDTLAPRAPLTGRVR
VLTPAAVAGEEVDTVVLAHVQEGAWPNTRLRSTLFGAAELALAAEDPELPTQPSALRAVQ
REGVIADELRLAVSALARARTRLLVTAVENDDESPSALVEVIERGAGPGWVDPDAAAADP
GPAPDPRRLVAALRQRLADLDPAETGQDRSAALLAALAAAGAPGADPALWYHQEPSSTTA
LLAATDPVTLSPSALERAHDCPQAWLLERAGGSPSSGPAQTIGTAVHRIAQDHPAGSEDV
DADGSPRDLLAELSLLLAPLHLDRTWSTRRLLGRAEDSVRLLSQHLAVTGMPLAVEAPFT
VRHGDVELRGTIDRIEGDTTGLRVVDLKTGRAAKSAVDAAVDLQLAAYQSAIRDGALADV
LGEDAPERLHGAQLVYVGTGTRKPAVRTQGALTDAENPRWFDEIVEDVAEQVRGSHVTAR
PNRHCDHCSVRRTCTLWPEGAQL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcgacctcccgccccgatgcctcccgcgcccgggtgcgcctgctgccgccc
gaccccgccgccgtgccgcaccccctgggcgacgccgcgctgcccgcgcagcgccgtgcc
ctcgcggccttcgcgcgcggcgaggacgtgctcgtccacggggcgcccgggagcggccgc
acccgcctcgcgctcaccgccgccctcgaggcctccggcgccgaggtgctgctgctgtcc
ccgcgtcgcgcctcggccgggctcctgcgcgacgccgtcgcacaggccgggggcgtctcc
cgggtgcgcgtcgcgacgcccgcggcctacggcttctccgtcgtgcgcgccgccgcggcg
cgcgacgggcgcggggagccgaccctcgtcacgggcgccgagcaggacgccctggtccgg
gacctgatctcctccgtggagacgtgggaggtcgacgtcgacgcggccacgcggacgctc
cccggcttccgggccgagctgcgcgacgtcatctcgcgcgcgaacgagctcgggctgctt
cccgccgacctcgagcacctcgcggcgcggcgagggcggaccgcgtggtgggacgcggcg
cacgtgctgcgcctctacctcgacgtgctcgacctcgaggcggccgcggccctcgatgcg
ggcccgcgccacgacgccggcgccatggtgcgccgcgccgccgagatcgtcgcggccggt
ccctcggcgtccggggccgccgtcggcgcggtcgggaccgtcgtcgtcgacgacgcccag
gacctcaccgccgcgggcatcgcgctcgtgcgcgccctgcgcgacgccggggcgcacgtg
ctcgtgacgtcctgccctgacgccgtggtcgactccttccgcggtgcggtgcccgatgcg
gcccgccgcatcctgccggtcgtgcgcggcccgcgccccgggcgcgccgtgcacgaggcg
gccctgcccgccatgctgcgcagccctcgcggcgcccgccccgtgctcgagtccctgcgc
ggccgcctgccgctcgcgggggcccccgcggcctcgcgtcggggcatcgcgtcgtcccgg
gacgacggcgcggcgcccgcgggcaccgccgacgtccccggcgcggtgagcgtgctgcgc
tgtgcgagcccgatcgaggaggcgcggcagatcgcgggcgtgctgcgcgatctccaccat
gcgcacgctgtcgcctacgacgagatggcgatcgtgtgccgctcgggcgccgccgtcgac
gacctcgcggacctgctccagcgcgagggcctgcccgtgaccgccgcccggcgtccgcgc
gccctgcgcgacgagcgcgtcgtcgccgacctgctcgggatcctcgagatcgcgctcgcc
ggcaccgtgccgaccccggagcacgccgccgagctgctgcgcggccccttcggggacgcc
gacgccctgcggctgcgccgcatccgccgcctcctgctgcacgcccacgacgcgaccgag
gcctccgacgctccgcaggcaggacgccgggagggggaggaggagccgcccacgaccgga
tcggccgagctgctggcccgtgccctcgtcgaggagcacgtgccgggccttcccgagccc
cgcgagcgggaccgcgccgccgcgcccgtgcaccgggtccggcgcatgatcgccgccgtg
cgcgcgctcggccccgcccccgcggccgtcgacgcgctgtgggccgcgtgggacgccgcc
caggtcgccgagggctggcgcaccgcctcgctcgagaccgacgacctcgacggcgccggg
gcgcgcggccgcctcgccgcccggcggctcgacgccgtgaccgcgctcttcgcggccgtc
gagcgcttcaccgagcgacgccccggtgccgacgcctccgggttcgtcgagcagatccgc
gaccaggccgtcgcggaggacaccctggccccgcgtgcacccctcacgggccgggtgcgc
gtgctcaccccggcggccgtcgcgggcgaggaggtcgacaccgtcgtgctcgcccacgtc
caggagggggcctggcccaacacgcgcctgcgctcgaccctgttcggcgccgccgagctc
gccctcgcggccgaggaccccgagctgcccacccagccctccgccctgcgcgccgtccag
cgcgagggcgtcatcgccgacgagctgcgcctggccgtgagcgcgctcgcccgcgcccgc
acccgactgctcgtgaccgccgtcgagaacgacgacgagagcccctccgccctcgtcgag
gtgatcgagcgcggcgccgggcccggctgggtcgaccccgacgccgcggccgccgacccc
gggcccgcccccgacccgcgccgcctcgtggcggccctgcgtcagcgcctcgccgacctc
gaccccgccgagaccggccaggaccggtccgcggcgctgctcgcggcgctcgccgccgcg
ggcgccccgggagccgaccccgccctctggtaccaccaggagccgagcagcaccacggcc
ctgctggcggcgacggaccccgtgaccctcagcccctcggcgctcgaacgcgcccacgac
tgccctcaggcatggctcctcgagcgcgccgggggcagcccgtcgagcggccccgcccag
accatcggcaccgccgtgcaccggatcgcccaggaccatcccgccggctccgaggacgtc
gacgccgacggcagcccgcgcgacctgctcgccgagctctccctgctgctggccccgctg
cacctcgaccgcacctggtccacccggcgcctgctcggacgcgcggaggactccgtgcgc
ctgctgtcccagcacctcgcggtgaccggcatgccgctcgccgtcgaggcgcccttcacc
gtgcgccacggcgacgtcgagctgcgaggcacgatcgaccgcatcgagggcgacacgacg
ggcctgcgcgtcgtggacctcaagaccggccgtgccgccaagagcgccgtcgacgccgcc
gtcgacctgcagctcgccgcctatcagagcgcgatccgcgacggcgccctggccgacgtg
ctgggggaggacgcccccgagcgcctccacggcgctcagctcgtctacgtcggcacgggg
acccgcaagcccgccgtccgcacccagggcgcgctcacggacgccgagaacccgcgctgg
ttcgacgagatcgtcgaggacgtcgccgagcaggtccgcggctcccacgtgaccgcccgc
cccaaccgccactgcgaccactgcagcgtgcgccgcacgtgcaccctctggcccgaagga
gcacagctgtga
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