Borrelia hermsii DAH: BH0230
Help
Entry
BH0230 CDS
T00764
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bhr
Borrelia hermsii DAH
Pathway
bhr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH0230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhr03021
]
BH0230
03019 Messenger RNA biogenesis [BR:
bhr03019
]
BH0230
Transcription machinery [BR:
bhr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BH0230
Messenger RNA biogenesis [BR:
bhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BH0230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
AAA_22
nSTAND_NTPase7
AAA_25
OB_RNB
CATSPERB_head
Motif
Other DBs
NCBI-ProteinID:
AAX16745
UniProt:
A0AA34WDF9
LinkDB
All DBs
Position
complement(234786..236366)
Genome browser
AA seq
526 aa
AA seq
DB search
MPFLKIYLIEEIMDKKYEEFDLEDEMKRLNSSKELKIDDNAKKKIVKVVTKKESVSSGFK
NPDIDRSRESNGASSDFDYDISDPDLESSIKTLEQSNIINFLGGKDFIVIDSLYDKPITE
IRKVVEGLGTNHTIAVTMKKTELIFLLVKILTEHNINVLFTGVLDVLSDGYGFLRTASNS
YLSGGNDVYVSPSQIRLFNLRTGDILYGQIRSPRDGERFFAMIKIKSINDQDPTFAQNRI
PFDNLTPLYPSSKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANA
ITTNYPDIVLMILLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLV
ENKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLT
IIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSE
EERSKILLIRKILSSVDDYEGVEALVEKMKKSKNNEIFLKTMSNGD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcttaaaaatttatctcatagaggagattatggataaaaaatatgaggaattt
gatttagaggatgaaatgaagcgtttaaattcttctaaggaattaaaaattgatgataat
gctaagaaaaaaatagttaaagttgtaactaaaaaagaatctgtttctagtggatttaaa
aaccctgatattgatagatcaagggaatctaatggagcctcatcagattttgattatgat
atatctgatccagatttagagagcagcattaagactcttgagcagagcaacattattaat
tttttaggtggtaaggactttatagttattgatagtctttatgataaaccaattaccgag
atcagaaaagttgttgaggggcttggcactaatcacactattgcggtaacaatgaagaag
acagaattaatatttttgcttgttaagatattaactgagcataatattaatgttttattt
actggtgttcttgatgttttaagtgatggatatggctttttacgtacagcatctaattct
tatctttcaggaggtaatgatgtttatgtttcgccgtctcagattagactttttaattta
aggacaggagatattttatatgggcagattaggtctccaagagatggcgagagatttttt
gcaatgattaagattaaaagtattaatgaccaggatcctacatttgcacaaaatagaata
ccttttgataatttaacacctttatatcctagttcaaagttgaatcttgaatatgaaaat
tgtaatatttctacgaggcttattaatcttttctcgcctattggaaaaggacaaagagca
ttaatagtatcacctccaaaagccgggaagactactttacttcaaaagatagccaatgca
attactactaattatccagacatcgttttaatgattttgctcattgatgagagacctgaa
gaggttactgatatgattcggggtgttaagggtgaagtaattgcatcaaattttgatgag
caagctagtagacacgttcaggttgcagagatggttattgaaaaggcaaaaagacttgtt
gagaataaaaaagatgtcgttattcttttagattctattacaagacttgcaagagcttat
aatcagactatgccaacttctggcaagatactctcaggaggagttgattctaatgcttta
cataaaccaaaaagattttttggttctgctagaaatatcgaggaaggcggaagtcttact
attatagctacagctttagttgatactgggagcaagatggatgaagttatatttgaggaa
tttaagagtactggtaacatggagttaattcttgatagaagtttggcagatagaagactt
ttccctgctattaatattaaaaaatcaggaacaagaaaagaagaattactcttgagtgaa
gaggaacgttctaaaattttgcttattaggaaaattttaagcagtgttgatgattatgag
ggcgttgaagctttggttgaaaagatgaaaaagagtaaaaacaatgaaatcttcctaaag
accatgagtaatggggattag
DBGET
integrated database retrieval system
