Bartonella henselae BM1374165: BM1374165_00058
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Entry
BM1374165_00058 CDS
T03309
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bhs
Bartonella henselae BM1374165
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhs03016
]
BM1374165_00058
Enzymes [BR:
bhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BM1374165_00058
Transfer RNA biogenesis [BR:
bhs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BM1374165_00058
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CDO46087
UniProt:
X5LY58
LinkDB
All DBs
Position
complement(80408..80947)
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AA seq
179 aa
AA seq
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MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDT
IKLPPFVLHIKSFEIFSSENTPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTP
HITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLSPSPSSNAPYIVKGSWRLQG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtctttttagcgcccttcagattcctcaaaaaacaactcaagaactcatatcg
ctgcaaaatggcttaccaaaagcacaatggattaacccacaaaactttcatatcactttg
tctttttttggtgagattgaaagcttactcgcagatgaactgatacgtgcctttgacaca
ataaagcttcctccttttgtcctacacataaagagttttgaaatttttagttcagaaaat
acgccacattctcttgttgtccgtattgagccttgtgaaactctcaaccttttacacaaa
aagatgcagtgtattcgcaatcacctaagattacctcctgatgaaagacaatttactccg
catatcactcttgctaggctgctcgatattcaacctgaagatctttcttactatctgtct
tctcgaagtaatttttcgttccccccctttgaggtaaacaattttgttttattgttatcg
ccctctccctcaagcaatgctccttatatcgtaaaaggaagctggagacttcaagggtaa
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